RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 TMEM102Q8N9M5 508 aaPredicted RBP12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 OR4L1Q8NH43 312 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 PROKR1Q8TCW9 393 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 TM9SF4Q92544 642 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 PMEPA1Q969W9 287 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 ELMO2Q96JJ3 720 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 RMDN2Q96LZ7 410 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 NLNQ9BYT8 704 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 PITPNM3Q9BZ71 974 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 SEMA4CQ9C0C4 833 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 RBSNQ9H1K0 784 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 OR52A5Q9H2C5 316 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 ACTL8Q9H568 366 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 RAB6BQ9NRW1 208 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 IRAK4Q9NWZ3 460 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 GNPTGQ9UJJ9 305 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 GUCA1BQ9UMX6 200 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 PCDHGA9Q9Y5G4 932 aaKnown RBP12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 KCNMB2Q9Y691 235 aa12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 CFAP20Q9Y6A4 193 aaKnown RBP12.49□□□□□ -0.41
SNORD88B-201ENST00000408454 SDK2Q58EX2 2172 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 RCCD1A6NED2 376 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 ZNF839A8K0R7 811 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 MEN1O00255 615 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 PEX12O00623 359 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 TERTO14746 1132 aaKnown RBP12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 KIF1CO43896 1103 aaKnown RBP12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 APRTP07741 180 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 PSMA3P25788 255 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 OAS2P29728 719 aaKnown RBP12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 CCNFP41002 786 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 NPY2RP49146 381 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 PGDP52209 483 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 ARSFP54793 590 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 SEMA5AQ13591 1074 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 ZC3H12BQ5HYM0 836 aaKnown RBP12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 PCID2Q5JVF3 399 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 IRAK1BP1Q5VVH5 260 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 SPESP1Q6UW49 350 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 ZNF662Q6ZS27 426 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 SLC13A5Q86YT5 568 aaPredicted RBP12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 UNC5BQ8IZJ1 945 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 OR52E1Q8NGJ3 308 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 OR5K2Q8NHB8 316 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 CT55Q8WUE5 264 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 ZNF501Q96CX3 271 aaPredicted RBP12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 FER1L6-AS2Q96M78 137 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 NDC1Q9BTX1 674 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 CARD6Q9BX69 1037 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 AP1M1Q9BXS5 423 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 IL1RAPL1Q9NZN1 696 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 NDOR1Q9UHB4 597 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 ZNF451Q9Y4E5 1061 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 NBEAQ8NFP9 2946 aa12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 ZNF106Q9H2Y7 1883 aaKnown RBP12.48□□□□□ -0.41
SNORD88B-201ENST00000408454 A0A0J9YY10 115 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 TMEM150CB9EJG8 249 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 PRMT5O14744 637 aaPredicted RBP12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 DPM1O60762 260 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 PHF2O75151 1096 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 NDUFS3O75489 264 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 S1PR4O95977 384 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 FOLR1P15328 257 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 WT1P19544 449 aaPredicted RBP12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 RAB28P51157 221 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 KPNA2P52292 529 aaKnown RBP12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 TLE1Q04724 770 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 SRSF6Q13247 344 aaKnown RBP12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 SPARCL1Q14515 664 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 DBN1Q16643 649 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 SLC5A12Q1EHB4 618 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 TCTE1Q5JU00 501 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 TSTD2Q5T7W7 516 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 PTRHD1Q6GMV3 140 aaKnown RBP12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 ASB18Q6ZVZ8 466 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 DCUN1D3Q8IWE4 304 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 OTUD6BQ8N6M0 293 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 SPC24Q8NBT2 197 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 ABHD17AQ96GS6 310 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 TCF12Q99081 682 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 HGH1Q9BTY7 390 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 SLC29A3Q9BZD2 475 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 CATSPERZQ9NTU4 200 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 ACTR10Q9NZ32 417 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 SAMD15Q9P1V8 674 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 SLC39A10Q9ULF5 831 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 TFR2Q9UP52 801 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 REXO2Q9Y3B8 237 aaKnown RBP12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 FAM169AQ9Y6X4 670 aa12.47□□□□□ -0.41
SNORD88B-201ENST00000408454 GOLGA6L10A0A0M3HER8 536 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 MAGEB16A2A368 324 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 DDX3YO15523 660 aaKnown RBP12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 PRPF4O43172 522 aaKnown RBP eCLIP12.46□□□□□ -0.411e-13■■□□□ 14.3
SNORD88B-201ENST00000408454 GPR39O43194 453 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 OR2B3O76000 313 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 METTL18O95568 372 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 NTRK1P04629 796 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 HSD17B2P37059 387 aa12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 BASP1P80723 227 aaKnown RBP12.46□□□□□ -0.41
SNORD88B-201ENST00000408454 ACVR1Q04771 509 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms