RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 MAP10Q9P2G4 905 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 SPIN1Q9Y657 262 aaPredicted RBP12.76□□□□□ -0.37
RNF43-201ENST00000407977 TCAF2A6NFQ2 919 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 FAM159BA6NKW6 160 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 ABCB7O75027 752 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 ENTPD6O75354 484 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 GNAZP19086 355 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 FMO3P31513 532 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 SCNN1AP37088 669 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 OXR1Q8N573 874 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 INO80EQ8NBZ0 244 aaPredicted RBP12.76□□□□□ -0.37
RNF43-201ENST00000407977 KLHL6Q8WZ60 621 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 C12orf43Q96C57 262 aaKnown RBP12.76□□□□□ -0.37
RNF43-201ENST00000407977 MAPKAP1Q9BPZ7 522 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 DUSP26Q9BV47 211 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 SIX2Q9NPC8 291 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 FKBP7Q9Y680 259 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 BCL9O00512 1426 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 ERCC6L2Q5T890 1561 aa12.76□□□□□ -0.37
RNF43-201ENST00000407977 DAPL1A0PJW8 107 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 ITPKBP27987 946 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 KHKP50053 298 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 TSPAN5P62079 268 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 TATDN1Q6P1N9 297 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 ZNF548Q8NEK5 533 aaPredicted RBP12.75□□□□□ -0.37
RNF43-201ENST00000407977 COL21A1Q96P44 957 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 FAM105AQ9NUU6 356 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 EVA1BQ9NVM1 165 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 FZD10Q9ULW2 581 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 KIF20BQ96Q89 1820 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 SPATA31D1Q6ZQQ2 1576 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 OR2AT4A6NND4 320 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 TRIM3O75382 744 aaPredicted RBP12.75□□□□□ -0.37
RNF43-201ENST00000407977 CST3P01034 146 aaPredicted RBP12.75□□□□□ -0.37
RNF43-201ENST00000407977 IGFALSP35858 605 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 TMBIM6P55061 237 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 DSC2Q02487 901 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 TAF1AQ15573 450 aaPredicted RBP12.75□□□□□ -0.37
RNF43-201ENST00000407977 OR2T5Q6IEZ7 315 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 SLC22A16Q86VW1 577 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 OR2T29Q8NH02 315 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 ZBED6CLQ96FA7 236 aaPredicted RBP12.75□□□□□ -0.37
RNF43-201ENST00000407977 ZSWIM3Q96MP5 696 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 FCRL5Q96RD9 977 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 CGREF1Q99674 301 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 CDK14O94921 469 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 INMTO95050 263 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 FGF19O95750 216 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 ZNF45Q02386 682 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 IKBKEQ14164 716 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 C1orf127Q8N9H9 656 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 DRAXINQ8NBI3 349 aaPredicted RBP12.75□□□□□ -0.37
RNF43-201ENST00000407977 MND1Q9BWT6 205 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 DTLQ9NZJ0 730 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 ALG5Q9Y673 324 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 SMIM28A0A1B0GU29 152 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 A0A1W2PQH9 124 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 CCRL2O00421 344 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 INSIG1O15503 277 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 IL1BP01584 269 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 C7P10643 843 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 GLDCP23378 1020 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 ARL2P36404 184 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 GRIA1P42261 906 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 ADAM15Q13444 863 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 PITRM1Q5JRX3 1037 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 TIFABQ6ZNK6 161 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 GALNT12Q8IXK2 581 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 TOMM5Q8N4H5 51 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 ZNF615Q8N8J6 731 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 OR10H4Q8NGA5 316 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 PIGKQ92643 395 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 TMBIM1Q969X1 311 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 CLIP3Q96DZ5 547 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 ACAT2Q9BWD1 397 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 LGR4Q9BXB1 951 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 PHPT1Q9NRX4 125 aaPredicted RBP12.75□□□□□ -0.37
RNF43-201ENST00000407977 ILVBLA1L0T0 632 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 K7EPI3 171 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 PRH1P02810 166 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 TACR2P21452 398 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 GDF10P55107 478 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 CSTF1Q05048 431 aaKnown RBP12.75□□□□□ -0.37
RNF43-201ENST00000407977 IQCF2Q8IXL9 164 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 NETO2Q8NC67 525 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 SCGB3A2Q96PL1 93 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 MMP27Q9H306 513 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 ACSS2Q9NR19 701 aa12.75□□□□□ -0.37
RNF43-201ENST00000407977 C9JVG2 144 aa12.74□□□□□ -0.37
RNF43-201ENST00000407977 I3L521 148 aa12.74□□□□□ -0.37
RNF43-201ENST00000407977 AGRPO00253 132 aa12.74□□□□□ -0.37
RNF43-201ENST00000407977 ITGA10O75578 1167 aa12.74□□□□□ -0.37
RNF43-201ENST00000407977 PENKP01210 267 aaPredicted RBP12.74□□□□□ -0.37
RNF43-201ENST00000407977 ECHS1P30084 290 aa12.74□□□□□ -0.37
RNF43-201ENST00000407977 GBX2P52951 348 aaPredicted RBP12.74□□□□□ -0.37
RNF43-201ENST00000407977 CRISP3P54108 245 aa12.74□□□□□ -0.37
RNF43-201ENST00000407977 TARDBPQ13148 414 aaKnown RBP eCLIP12.74□□□□□ -0.37
RNF43-201ENST00000407977 TOMM20Q15388 145 aa12.74□□□□□ -0.37
RNF43-201ENST00000407977 FAM189A2Q15884 450 aa12.74□□□□□ -0.37
RNF43-201ENST00000407977 ZUFSPQ96AP4 578 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms