RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 SCRG1O75711 98 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 PVRP15151 417 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 ST6GAL1P15907 406 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 CXCR5P32302 372 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 KCNJ1P48048 391 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 CRADDP78560 199 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 CCZ1BP86790 482 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 CCZ1P86791 482 aaPredicted RBP18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 LAMB3Q13751 1172 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 DRICH1Q6PGQ1 229 aaPredicted RBP18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 LDB1Q86U70 411 aaPredicted RBP18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 PTRH1Q86Y79 214 aaKnown RBP18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 TMEM126BQ8IUX1 230 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.71■□□□□ 0.582e-10■■■■■ 34
SMARCB1-204ENST00000407422 PITPNM3Q9BZ71 974 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 TRIM4Q9C037 500 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 KCND3Q9UK17 655 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 ICKQ9UPZ9 632 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 ASF1AQ9Y294 204 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 DRG1Q9Y295 367 aaKnown RBP18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 PCDHGA6Q9Y5G7 932 aa18.71■□□□□ 0.58
SMARCB1-204ENST00000407422 SUV39H1O43463 412 aa18.7■□□□□ 0.58
SMARCB1-204ENST00000407422 OR56A5P0C7T3 313 aa18.7■□□□□ 0.58
SMARCB1-204ENST00000407422 TPBGLP0DKB5 382 aa18.7■□□□□ 0.58
SMARCB1-204ENST00000407422 CSE1LP55060 971 aaKnown RBP18.7■□□□□ 0.58
SMARCB1-204ENST00000407422 SESN2P58004 480 aaPredicted RBP18.7■□□□□ 0.58
SMARCB1-204ENST00000407422 LYPLAL1Q5VWZ2 237 aa18.7■□□□□ 0.58
SMARCB1-204ENST00000407422 TUBD1Q9UJT1 453 aa18.7■□□□□ 0.58
SMARCB1-204ENST00000407422 PIPSLA2A3N6 862 aa18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 CEP104O60308 925 aa18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 CPNE3O75131 537 aaKnown RBP18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 CREG1O75629 220 aa18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 RPS18P62269 152 aaKnown RBP18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 PRAMEP78395 509 aa18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 ABRQ12979 859 aa18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 GPS2Q13227 327 aa18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 SYTL3Q4VX76 610 aa18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 FASTKD1Q53R41 847 aaKnown RBP18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 NLRP9Q7RTR0 991 aa18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 GSTA5Q7RTV2 222 aa18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 PPHLN1Q8NEY8 458 aaKnown RBP18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 OR8K5Q8NH50 307 aa18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 TRAPPC9Q96Q05 1148 aa18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 ACTL8Q9H568 366 aa18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 ZNF71Q9NQZ8 489 aaPredicted RBP18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 EIF2B3Q9NR50 452 aaKnown RBP18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 ACTR10Q9NZ32 417 aa18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 MARCH4Q9P2E8 410 aaPredicted RBP18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 KCNMB2Q9Y691 235 aa18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 RELNP78509 3460 aa18.69■□□□□ 0.58
SMARCB1-204ENST00000407422 UBR5O95071 2799 aaPredicted RBP18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 COL12A1Q99715 3063 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 CDC14CA4D256 554 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 IQCF5A8MTL0 148 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 C2orf74A8MZ97 194 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 C21orf140B9A014 251 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 CCR7P32248 378 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 BASP1P80723 227 aaKnown RBP18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 UNC5AQ6ZN44 842 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 TRIM58Q8NG06 486 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 OR1L3Q8NH93 324 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 LKAAEAR1Q8TD35 194 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 ABHD17AQ96GS6 310 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 SGSM3Q96HU1 749 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 TTC1Q99614 292 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 TWSG1Q9GZX9 223 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 PLAGL1Q9UM63 463 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 ZKSCAN5Q9Y2L8 839 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 TDRKHQ9Y2W6 561 aaKnown RBP18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 NBASA2RRP1 2371 aa18.68■□□□□ 0.58
SMARCB1-204ENST00000407422 TMEM150CB9EJG8 249 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 ZNF789Q5FWF6 425 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 PCID2Q5JVF3 399 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 LCN10Q6JVE6 187 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 SPESP1Q6UW49 350 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 TRIM73Q86UV7 250 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 VRK3Q8IV63 474 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 TBC1D21Q8IYX1 336 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 OR5K2Q8NHB8 316 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 PEX13Q92968 403 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 MR1Q95460 341 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 LATS2Q9NRM7 1088 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 CATSPERZQ9NTU4 200 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 SPHK1Q9NYA1 384 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 MED13Q9UHV7 2174 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 PPP2R2CQ9Y2T4 447 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 FER1L5A0AVI2 2057 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 UGT2B7P16662 529 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 ZNF517Q6ZMY9 492 aaPredicted RBP18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 ATG14Q6ZNE5 492 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 CDHR3Q6ZTQ4 885 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 PRELID2Q8N945 189 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 C9orf43Q8TAL5 461 aaPredicted RBP18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 MAIP1Q8WWC4 291 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 CHST8Q9H2A9 424 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 FANCEQ9HB96 536 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 TREX1Q9NSU2 369 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 CDYLQ9Y232 598 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 POLHQ9Y253 713 aa18.67■□□□□ 0.58
SMARCB1-204ENST00000407422 TCRBV7S3A2A0A539 114 aa18.66■□□□□ 0.58
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