RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 CDC6Q99741 560 aa8.17□□□□□ -1.1
GPC3-203ENST00000406757 SELENOSQ9BQE4 189 aa8.17□□□□□ -1.1
GPC3-203ENST00000406757 WWP1Q9H0M0 922 aa8.17□□□□□ -1.1
GPC3-203ENST00000406757 COG4Q9H9E3 785 aa8.17□□□□□ -1.1
GPC3-203ENST00000406757 MLXIPLQ9NP71 852 aa8.17□□□□□ -1.1
GPC3-203ENST00000406757 PRDM8Q9NQV8 689 aa8.17□□□□□ -1.1
GPC3-203ENST00000406757 GPR27Q9NS67 375 aa8.17□□□□□ -1.1
GPC3-203ENST00000406757 TMEM216Q9P0N5 145 aa8.17□□□□□ -1.1
GPC3-203ENST00000406757 SLC17A7Q9P2U7 560 aa8.17□□□□□ -1.1
GPC3-203ENST00000406757 GPR34Q9UPC5 381 aa8.17□□□□□ -1.1
GPC3-203ENST00000406757 CDYLQ9Y232 598 aa8.17□□□□□ -1.1
GPC3-203ENST00000406757 WDR37Q9Y2I8 494 aa8.17□□□□□ -1.1
GPC3-203ENST00000406757 ACOT9Q9Y305 439 aa8.17□□□□□ -1.1
GPC3-203ENST00000406757 PCDHGB2Q9Y5G2 931 aa8.17□□□□□ -1.1
GPC3-203ENST00000406757 CFAP20Q9Y6A4 193 aaKnown RBP8.17□□□□□ -1.1
GPC3-203ENST00000406757 COMMD10Q9Y6G5 202 aa8.17□□□□□ -1.1
GPC3-203ENST00000406757 A0A087X1B8 175 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 SLC5A10A0PJK1 596 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 TRABD2BA6NFA1 517 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 COPEO14579 308 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 TOR1BO14657 336 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 TNFRSF10CO14798 259 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 ZBTB14O43829 449 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 TDRD6O60522 2096 aaKnown RBP8.16□□□□□ -1.1
GPC3-203ENST00000406757 MAGEC1O60732 1142 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 GPC4O75487 556 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 TSPAN12O95859 305 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 APOA4P06727 396 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 CTSEP14091 401 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 CD1DP15813 335 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 ZNF37AP17032 561 aaPredicted RBP8.16□□□□□ -1.1
GPC3-203ENST00000406757 RPA3P35244 121 aaPredicted RBP8.16□□□□□ -1.1
GPC3-203ENST00000406757 CCNFP41002 786 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 ACTR1BP42025 376 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 GRK6P43250 576 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 KCNC1P48547 511 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 HK3P52790 923 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 IL2P60568 153 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 ACTR1AP61163 376 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 SLC18A2Q05940 514 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 CYP4F3Q08477 520 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 DNAJC3Q13217 504 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 SUZ12Q15022 739 aaKnown RBP8.16□□□□□ -1.1
GPC3-203ENST00000406757 TEAD4Q15561 434 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 OR4D1Q15615 310 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 ZNF658BQ4V348 819 aaPredicted RBP8.16□□□□□ -1.1
GPC3-203ENST00000406757 TAF1BQ53T94 588 aaPredicted RBP8.16□□□□□ -1.1
GPC3-203ENST00000406757 PRRT3Q5FWE3 981 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 UGT3A1Q6NUS8 523 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 DUS1LQ6P1R4 473 aaKnown RBP8.16□□□□□ -1.1
GPC3-203ENST00000406757 TBC1D1Q86TI0 1168 aaPredicted RBP8.16□□□□□ -1.1
GPC3-203ENST00000406757 PARGQ86W56 976 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 CENPLQ8N0S6 344 aaPredicted RBP8.16□□□□□ -1.1
GPC3-203ENST00000406757 BANPQ8N9N5 519 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 LMNTD1Q8N9Z9 388 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 TCP10LQ8TDR4 215 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 ISL2Q96A47 359 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 PTERQ96BW5 349 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 SCARF2Q96GP6 870 aaPredicted RBP8.16□□□□□ -1.1
GPC3-203ENST00000406757 ZNF514Q96K75 400 aaPredicted RBP8.16□□□□□ -1.1
GPC3-203ENST00000406757 LINC00615Q96LM1 132 aaPredicted RBP8.16□□□□□ -1.1
GPC3-203ENST00000406757 GPR78Q96P69 363 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 SMC6Q96SB8 1091 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 NRTNQ99748 197 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 TSSK1BQ9BXA7 367 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 ALG9Q9H6U8 611 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 RMI1Q9H9A7 625 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 SYTL2Q9HCH5 934 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 ACSS2Q9NR19 701 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 LATS2Q9NRM7 1088 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 UCKL1Q9NWZ5 548 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 SCHIP1Q9P0W5 487 aaPredicted RBP8.16□□□□□ -1.1
GPC3-203ENST00000406757 CPSF2Q9P2I0 782 aaKnown RBP8.16□□□□□ -1.1
GPC3-203ENST00000406757 APOBEC3BQ9UH17 382 aaKnown RBP8.16□□□□□ -1.1
GPC3-203ENST00000406757 ADAMTS6Q9UKP5 1117 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 PIKFYVEQ9Y2I7 2098 aa8.16□□□□□ -1.1
GPC3-203ENST00000406757 WDR91A4D1P6 747 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 PDZK1P1A8MUH7 402 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 F8W8V4 182 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 QSOX1O00391 747 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 BTN3A1O00481 513 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 TNFSF14O43557 240 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 DKK1O94907 266 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 KLHL2O95198 593 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 CSF2P04141 144 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 LTA4HP09960 611 aaKnown RBP8.15□□□□□ -1.1
GPC3-203ENST00000406757 MYF5P13349 255 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 TFEBP19484 476 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 DGKAP23743 735 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 ATP5DP30049 168 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 SKIV2L2P42285 1042 aaKnown RBP8.15□□□□□ -1.1
GPC3-203ENST00000406757 CTSKP43235 329 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 BDKRB1P46663 353 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 CCT8P50990 548 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 ATP1A2P50993 1020 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 CLCNKAP51800 687 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 CLCA4Q14CN2 919 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 SHBQ15464 509 aa8.15□□□□□ -1.1
GPC3-203ENST00000406757 TSNQ15631 228 aaKnown RBP8.15□□□□□ -1.1
GPC3-203ENST00000406757 TTLL9Q3SXZ7 439 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms