RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 PNRC1Q12796 327 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 RPA4Q13156 261 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 PARP10Q53GL7 1025 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 GCNT6Q5T4J0 391 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 OTUD1Q5VV17 481 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 KIAA1161Q6NSJ0 714 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 NOTUMQ6P988 496 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 NUP54Q7Z3B4 507 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 DGLUCYQ7Z3D6 616 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 GPR180Q86V85 440 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 FBXL14Q8N1E6 418 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 IQCF1Q8N6M8 205 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 RBMXL3Q8N7X1 1067 aaKnown RBP4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 SPATA20Q8TB22 786 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 SLC44A1Q8WWI5 657 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 NSMAFQ92636 917 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 RAD54LQ92698 747 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 ATP6V0A1Q93050 837 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 ST6GALNAC6Q969X2 333 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 FAM81BQ96LP2 452 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 ZNF582Q96NG8 517 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 PCYT2Q99447 389 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 CMKLR1Q99788 373 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 TMEM204Q9BSN7 226 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 FN3KQ9H479 309 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 DNAJC17Q9NVM6 304 aaKnown RBP4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 OSER1Q9NX31 292 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 C1RLQ9NZP8 487 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 ITGA11Q9UKX5 1188 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 AGO1Q9UL18 857 aaKnown RBP4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 PADI2Q9Y2J8 665 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 EVPLQ92817 2033 aa4.72□□□□□ -1.65
HMGB1P13-201ENST00000406019 PRSS51A0A1B0GVH4 220 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 ASAP2O43150 1006 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 AP5Z1O43299 807 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 SELENOFO60613 162 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 GAGE7O76087 117 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 CH25HO95992 272 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 CSN3P07498 182 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 PLA2G4BP0C869 781 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 GAGE12FP0CL80 117 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 GAGE12GP0CL81 117 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 GAGE12IP0CL82 117 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 ACAT1P24752 427 aaKnown RBP4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 WNT5AP41221 380 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 LHX1P48742 406 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 SLC9A3P48764 834 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 ENTPD1P49961 510 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 UBASH3AP57075 661 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 YBEYP58557 167 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 ST8SIA6P61647 398 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 GAGE1Q13065 139 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 GAGE4Q13068 117 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 FAM174BQ3ZCQ3 159 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 KBTBD12Q3ZCT8 623 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 GRTP1Q5TC63 336 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 TXNRD3NBQ6F5E7 133 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 CNSTQ6PJW8 725 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 TMEM270Q6UE05 265 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 TMPRSS11FQ6ZWK6 438 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 ZNF611Q8N823 705 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 UXS1Q8NBZ7 420 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 SMPDL3BQ92485 455 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 MOB3AQ96BX8 217 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 SPATA33Q96N06 139 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 SFXN2Q96NB2 322 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 ZPBPQ9BS86 351 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 BTBD10Q9BSF8 475 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 SF3B5Q9BWJ5 86 aaKnown RBP4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 CACNG6Q9BXT2 260 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 NOX4Q9NPH5 578 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 IARS2Q9NSE4 1012 aaKnown RBP4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 NPAP1Q9NZP6 1156 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 VPS18Q9P253 973 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 STK26Q9P289 416 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 RNF150Q9ULK6 438 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 PCDHAC2Q9Y5I4 1007 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 PTPRCP08575 1304 aa4.71□□□□□ -1.66
HMGB1P13-201ENST00000406019 NEMP2A6NFY4 417 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 YDJCA8MPS7 323 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 LACTBL1A8MY62 500 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 ZBTB14O43829 449 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 RFPL2O75678 378 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 MOCS3O95396 460 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 RLN1P04808 185 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 HOXC6P09630 235 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 CD27P26842 260 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 AMTP48728 403 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 CD81P60033 236 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 RUNX1T1Q06455 604 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 WASHC5Q12768 1159 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 TNK1Q13470 666 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 SMC1AQ14683 1233 aaKnown RBP4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 ZNF789Q5FWF6 425 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 FSCBQ5H9T9 825 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 CCDC158Q5M9N0 1113 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 FNBP1LQ5T0N5 605 aa4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 TYW3Q6IPR3 259 aaKnown RBP4.7□□□□□ -1.66
HMGB1P13-201ENST00000406019 RAB12Q6IQ22 244 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms