RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 FATE1Q969F0 183 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 ASB3Q9Y575 518 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 A0A1W2PRG6 482 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 PRORSD1PA6NEY8 169 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 DCLK1O15075 740 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 VNN1O95497 513 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 PEX2P28328 305 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 AP3S2P59780 193 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 SOWAHAQ2M3V2 549 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 HID1Q8IV36 788 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 C12orf42Q96LP6 360 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 CADM1Q9BY67 442 aaKnown RBP18.2■□□□□ 0.5
USP25-204ENST00000400183 FAM234BA2RU67 622 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 GRK6P43250 576 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 CHRNA4P43681 627 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 LCN1P1Q5VSP4 162 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 TPGS2Q68CL5 300 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 ZNF599Q96NL3 588 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 ZNF347Q96SE7 839 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 SNX7Q9UNH6 387 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 RBMX2Q9Y388 322 aaKnown RBP18.2■□□□□ 0.5
USP25-204ENST00000400183 RIMBP3CA6NJZ7 1639 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 RIMBP3BA6NNM3 1639 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 RIMBP3Q9UFD9 1639 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 ITGA3P26006 1051 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 MAT2AP31153 395 aaKnown RBP18.2■□□□□ 0.5
USP25-204ENST00000400183 SEPHS1P49903 392 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 RABGGTBP53611 331 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 SEC13P55735 322 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 TNFAIP8L3Q5GJ75 292 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 RALGPS1Q5JS13 557 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 NRSN1Q8IZ57 195 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 CHST4Q8NCG5 386 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 CNTN3Q9P232 1028 aa18.2■□□□□ 0.5
USP25-204ENST00000400183 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.19■□□□□ 0.5
USP25-204ENST00000400183 TMEM63AO94886 807 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 IL12BP29460 328 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 SCN1BQ07699 218 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 CARD16Q5EG05 197 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 TMEM214Q6NUQ4 689 aaKnown RBP18.19■□□□□ 0.5
USP25-204ENST00000400183 OR2AG1Q9H205 316 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 CXorf21Q9HAI6 301 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 POLMQ9NP87 494 aaPredicted RBP18.19■□□□□ 0.5
USP25-204ENST00000400183 NDRG2Q9UN36 371 aaKnown RBP18.19■□□□□ 0.5
USP25-204ENST00000400183 ARL5AQ9Y689 179 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 CCNKO75909 580 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 RAP2AP10114 183 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 POU2F1P14859 743 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 SCNN1AP37088 669 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 PGBD2Q6P3X8 592 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 USP30Q70CQ3 517 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 CCDC36Q8IYA8 594 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 POMPQ9Y244 141 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 MROH2AA6NES4 1674 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 RGS20O76081 388 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 HSD17B2P37059 387 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 BLKP51451 505 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 PPP3R1P63098 170 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 ERVK-8P63133 956 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 SLC13A2Q13183 592 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 EIPR1Q53HC9 387 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 XKR4Q5GH76 650 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 CLEC20AQ6ZU45 233 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 SATL1Q86VE3 508 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 CAPNS2Q96L46 248 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 C11orf16Q9NQ32 467 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 DNAAF2Q9NVR5 837 aaKnown RBP18.19■□□□□ 0.5
USP25-204ENST00000400183 PEX16Q9Y5Y5 336 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 TPD52L2O43399 206 aaKnown RBP18.19■□□□□ 0.5
USP25-204ENST00000400183 EFNA1P20827 205 aaPredicted RBP18.19■□□□□ 0.5
USP25-204ENST00000400183 SH3PXD2AQ5TCZ1 1133 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 MTERF1Q99551 399 aaKnown RBP18.19■□□□□ 0.5
USP25-204ENST00000400183 HSD3B7Q9H2F3 369 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 TLX3O43711 291 aaPredicted RBP18.19■□□□□ 0.5
USP25-204ENST00000400183 DDX6P26196 483 aaKnown RBP eCLIP18.19■□□□□ 0.5
USP25-204ENST00000400183 CSKP41240 450 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 HSF2Q03933 536 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 FAM156AQ8NDB6 213 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 DCAKDQ8WVC6 231 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 CEP295NLQ96MC4 621 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 PHF12Q96QT6 1004 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 DNAJB9Q9UBS3 223 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 TLL2Q9Y6L7 1015 aa18.19■□□□□ 0.5
USP25-204ENST00000400183 NOS1APO75052 506 aaPredicted RBP18.18■□□□□ 0.5
USP25-204ENST00000400183 AVPR1BP47901 424 aa18.18■□□□□ 0.5
USP25-204ENST00000400183 CRISP3P54108 245 aa18.18■□□□□ 0.5
USP25-204ENST00000400183 PRMT2P55345 433 aa18.18■□□□□ 0.5
USP25-204ENST00000400183 MTPNP58546 118 aa18.18■□□□□ 0.5
USP25-204ENST00000400183 TMEM44Q2T9K0 475 aa18.18■□□□□ 0.5
USP25-204ENST00000400183 SLC35B2Q8TB61 432 aa18.18■□□□□ 0.5
USP25-204ENST00000400183 CERS4Q9HA82 394 aa18.18■□□□□ 0.5
USP25-204ENST00000400183 MRPS30Q9NP92 439 aaKnown RBP18.18■□□□□ 0.5
USP25-204ENST00000400183 WASF2Q9Y6W5 498 aa18.18■□□□□ 0.5
USP25-204ENST00000400183 GRSF1Q12849 480 aaKnown RBP eCLIP18.18■□□□□ 0.5
USP25-204ENST00000400183 SWI5Q1ZZU3 235 aa18.18■□□□□ 0.5
USP25-204ENST00000400183 SLC30A8Q8IWU4 369 aa18.18■□□□□ 0.5
USP25-204ENST00000400183 TP53INP1Q96A56 240 aa18.18■□□□□ 0.5
USP25-204ENST00000400183 C11orf84Q9BUA3 381 aaPredicted RBP18.18■□□□□ 0.5
USP25-204ENST00000400183 GPR88Q9GZN0 384 aa18.18■□□□□ 0.5
USP25-204ENST00000400183 COMMD4Q9H0A8 199 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms