RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 SUV39H1O43463 412 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 TOXO94900 526 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 CDRT1O95170 752 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 UROSP10746 265 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 FSHRP23945 695 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 AKAP5P24588 427 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 EIF2DP41214 584 aaKnown RBP9.15□□□□□ -0.94
COL28A1-201ENST00000399429 CRATP43155 626 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 GSTM5P46439 218 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 ZNF132P52740 706 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 CTBSQ01459 385 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 EFR3AQ14156 821 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 GPAT3Q53EU6 434 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 SPRED1Q7Z699 444 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 TMEM135Q86UB9 458 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 DTWD1Q8N5C7 304 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 AFG1LQ8WV93 481 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 SELENOMQ8WWX9 145 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 C11orf24Q96F05 449 aaPredicted RBP9.15□□□□□ -0.94
COL28A1-201ENST00000399429 CNDP2Q96KP4 475 aaKnown RBP9.15□□□□□ -0.94
COL28A1-201ENST00000399429 TMEM209Q96SK2 561 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 SLAMF8Q9P0V8 285 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 NLKQ9UBE8 527 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 SLCO3A1Q9UIG8 710 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 MAU2Q9Y6X3 613 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 B4GALT4O60513 344 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 CREG1O75629 220 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 TPPPO94811 219 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 STSP08842 583 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 PTPN2P17706 415 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 CXCR2P25025 360 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 HTR1EP28566 365 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 SDC2P34741 201 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 MAZP56270 477 aaKnown RBP9.15□□□□□ -0.94
COL28A1-201ENST00000399429 SCRN3Q0VDG4 424 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 ST3GAL4Q11206 333 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 BTN1A1Q13410 526 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 SELPLGQ14242 412 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 POU4F3Q15319 338 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 LY6KQ17RY6 165 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 PLA2G4EQ3MJ16 856 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 KIAA1614Q5VZ46 1190 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 FAM122CQ6P4D5 195 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 BLOC1S3Q6QNY0 202 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 ZNF534Q76KX8 674 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 TAS1R3Q7RTX0 852 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 KIF18BQ86Y91 864 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 SLC38A6Q8IZM9 456 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 C3orf30Q96M34 536 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 KLHL5Q96PQ7 755 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 GON7Q9BXV9 100 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 NTN4Q9HB63 628 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 AP3M1Q9Y2T2 418 aa9.15□□□□□ -0.94
COL28A1-201ENST00000399429 GNG14A0A1W2PPG7 69 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 FAM155AB1AL88 458 aaPredicted RBP9.15□□□□□ -0.95
COL28A1-201ENST00000399429 ENPP3O14638 875 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 TLL1O43897 1013 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 DFNA5O60443 496 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 CDK14O94921 469 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 GOT2P00505 430 aaKnown RBP9.15□□□□□ -0.95
COL28A1-201ENST00000399429 ALPLP05186 524 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 G6PDP11413 515 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 KCNA5P22460 613 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 ARNTP27540 789 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 CDH5P33151 784 aaPredicted RBP9.15□□□□□ -0.95
COL28A1-201ENST00000399429 CNTN2Q02246 1040 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 ALDH6A1Q02252 535 aaKnown RBP9.15□□□□□ -0.95
COL28A1-201ENST00000399429 ALFQ53S48 1182 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 ZNF678Q5SXM1 525 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 PDE12Q6L8Q7 609 aaKnown RBP9.15□□□□□ -0.95
COL28A1-201ENST00000399429 CES5AQ6NT32 575 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 PAMR1Q6UXH9 720 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 GDPD3Q7L5L3 318 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 ADGRD2Q7Z7M1 963 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 SLC22A17Q8WUG5 538 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 TMEM125Q96AQ2 219 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 NACC2Q96BF6 587 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 VMP1Q96GC9 406 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 GPR63Q9BZJ6 419 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 NXF3Q9H4D5 531 aaKnown RBP9.15□□□□□ -0.95
COL28A1-201ENST00000399429 OPTCQ9UBM4 332 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 PCDHB14Q9Y5E9 798 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 LAMB4A4D0S4 1761 aa9.15□□□□□ -0.95
COL28A1-201ENST00000399429 NT5C1B-RDH14C9J2C7 533 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 PER2O15055 1255 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 COX7A2P14406 83 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 WEE1P30291 646 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 MLLT10P55197 1068 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 SH3BP2P78314 561 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 RPP38P78345 283 aaKnown RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 MZT2AQ6P582 158 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 ZNF613Q6PF04 617 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 DOK6Q6PKX4 331 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 LSMEM2Q8N112 164 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 YIPF7Q8N8F6 280 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 OR10T2Q8NGX3 314 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 DHRS9Q9BPW9 319 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 GTPBP2Q9BX10 602 aaKnown RBP9.14□□□□□ -0.95
COL28A1-201ENST00000399429 AKIP1Q9NQ31 210 aa9.14□□□□□ -0.95
COL28A1-201ENST00000399429 TIAM2Q8IVF5 1701 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms