RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 HNRNPCL4P0DMR1 293 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 FDPSP14324 419 aaKnown RBP2.6□□□□□ -1.99
CD47-203ENST00000398258 DNASE1P24855 282 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 PSMA3P25788 255 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 HOXC13P31276 330 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 SLC6A6P31641 620 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 MATR3P43243 847 aaKnown RBP eCLIP2.6□□□□□ -1.99
CD47-203ENST00000398258 SLC9A3P48764 834 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 NPY4RP50391 375 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 CD81P60033 236 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 ISL1P61371 349 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 RPL24P83731 157 aaKnown RBP2.6□□□□□ -1.99
CD47-203ENST00000398258 TSPY1Q01534 308 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 EEF1A2Q05639 463 aaKnown RBP2.6□□□□□ -1.99
CD47-203ENST00000398258 ACSM1Q08AH1 577 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 TNIP1Q15025 636 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 OR7E24Q6IFN5 339 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 KLC3Q6P597 504 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 ABI3BPQ7Z7G0 1075 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 GPALPP1Q8IXQ4 340 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 TTC30BQ8N4P2 665 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 GBGT1Q8N5D6 347 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 CPSF7Q8N684 471 aaKnown RBP2.6□□□□□ -1.99
CD47-203ENST00000398258 KCNH5Q8NCM2 988 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 C9orf43Q8TAL5 461 aaPredicted RBP2.6□□□□□ -1.99
CD47-203ENST00000398258 MRPS27Q92552 414 aaKnown RBP2.6□□□□□ -1.99
CD47-203ENST00000398258 EXT2Q93063 718 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 SPSB1Q96BD6 273 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 DHX58Q96C10 678 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 SPDL1Q96EA4 605 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 ADGRG7Q96K78 797 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 FEVQ99581 238 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 SEPHS2Q99611 448 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 C1QTNF4Q9BXJ3 329 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 ALDH8A1Q9H2A2 487 aaPredicted RBP2.6□□□□□ -1.99
CD47-203ENST00000398258 ARRDC1-AS1Q9H2J1 176 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 ZWILCHQ9H900 591 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 PFDN4Q9NQP4 134 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 ARGLU1Q9NWB6 273 aaPredicted RBP2.6□□□□□ -1.99
CD47-203ENST00000398258 DPP3Q9NY33 737 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 LRWD1Q9UFC0 647 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 SLC24A2Q9UI40 661 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 GTF3C4Q9UKN8 822 aa2.6□□□□□ -1.99
CD47-203ENST00000398258 TAF1P21675 1872 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 MED19A0JLT2 244 aaPredicted RBP2.59□□□□□ -1.99
CD47-203ENST00000398258 ASPDHA6ND91 283 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 HNRNPCL2B2RXH8 293 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 TULP2O00295 520 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 CLDN4O14493 209 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 CLIC2O15247 247 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 SYNGR3O43761 229 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 TFAP2AP05549 437 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 ATP5BP06576 529 aaKnown RBP2.59□□□□□ -1.99
CD47-203ENST00000398258 H1F0P07305 194 aaKnown RBP2.59□□□□□ -1.99
CD47-203ENST00000398258 ADRA2CP18825 462 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 CYP11B2P19099 503 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 CASTP20810 708 aaKnown RBP2.59□□□□□ -1.99
CD47-203ENST00000398258 TCEA1P23193 301 aaKnown RBP2.59□□□□□ -1.99
CD47-203ENST00000398258 MCCP23508 829 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 EEF1B2P24534 225 aaKnown RBP2.59□□□□□ -1.99
CD47-203ENST00000398258 PTPN3P26045 913 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 CDC25CP30307 473 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 GNL1P36915 607 aaPredicted RBP2.59□□□□□ -1.99
CD47-203ENST00000398258 GAS1P54826 345 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 KRTAP10-8P60410 259 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 POLR2LP62875 67 aaKnown RBP2.59□□□□□ -1.99
CD47-203ENST00000398258 PITX1P78337 314 aaPredicted RBP2.59□□□□□ -1.99
CD47-203ENST00000398258 RPL36AP83881 106 aaKnown RBP2.59□□□□□ -1.99
CD47-203ENST00000398258 PPARDQ03181 441 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 MFAP5Q13361 173 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 TUBB2AQ13885 445 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 C6orf163Q5TEZ5 329 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 PACS1Q6VY07 963 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 RAD9BQ6WBX8 426 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 TMPRSS11FQ6ZWK6 438 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 TUBA1AQ71U36 451 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 DET1Q7L5Y6 550 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 ADCK2Q7Z695 626 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 PTOV1Q86YD1 416 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 OR8H3Q8N146 312 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 IQUBQ8NA54 791 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 PPFIBP2Q8ND30 876 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 OCC1Q8TAD7 63 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 SPATA20Q8TB22 786 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 SORCS1Q8WY21 1168 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 DAZLQ92904 295 aaKnown RBP2.59□□□□□ -1.99
CD47-203ENST00000398258 MTERF3Q96E29 417 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 SIPA1Q96FS4 1042 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 IGSF21Q96ID5 467 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 SGK494Q96LW2 274 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 RMDN2Q96LZ7 410 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 C17orf77Q96MU5 243 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 DUX5Q96PT3 197 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 TUBA1CQ9BQE3 449 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 LRRC1Q9BTT6 524 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 TUBB2BQ9BVA1 445 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 VN1R1Q9GZP7 353 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 FZD8Q9H461 694 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 RETREG1Q9H6L5 497 aa2.59□□□□□ -1.99
CD47-203ENST00000398258 ACKR4Q9NPB9 350 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms