RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 BTBD10Q9BSF8 475 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 ARMC7Q9H6L4 198 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 NOL6Q9H6R4 1146 aaKnown RBP8.11□□□□□ -1.11
PTPRD-204ENST00000397606 PRSS16Q9NQE7 514 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 SIRPGQ9P1W8 387 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 INVSQ9Y283 1065 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 PRAMEF26H0Y7S4 382 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 STX16-NPEPL1H3BU86 382 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 STX16O14662 325 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 RFPL1O75677 317 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 OLFM2O95897 454 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 RPS3P23396 243 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTPRD-204ENST00000397606 ADRA1AP35348 466 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 WDR4P57081 412 aaKnown RBP8.11□□□□□ -1.11
PTPRD-204ENST00000397606 LSM12Q3MHD2 195 aaKnown RBP8.11□□□□□ -1.11
PTPRD-204ENST00000397606 CCNYL2Q5T2Q4 361 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 CLEC6AQ6EIG7 209 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 AGTRAPQ6RW13 159 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 PGBD5Q8N414 524 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 MDGA1Q8NFP4 955 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 WBP2Q969T9 261 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 PYCR2Q96C36 320 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 CHFRQ96EP1 664 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 DTD2Q96FN9 168 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 ROGDIQ9GZN7 287 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 MMADHCQ9H3L0 296 aaPredicted RBP8.11□□□□□ -1.11
PTPRD-204ENST00000397606 WDR55Q9H6Y2 383 aaPredicted RBP8.11□□□□□ -1.11
PTPRD-204ENST00000397606 TTC3P53804 2025 aa8.11□□□□□ -1.11
PTPRD-204ENST00000397606 PRR5-ARHGAP8B1AHC4 643 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 MUSKO15146 869 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 IFNA16P05015 189 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ATXN1LP0C7T5 689 aaKnown RBP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 SRFP11831 508 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 NQO1P15559 274 aaKnown RBP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ERFP50548 548 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ZNF140P52738 457 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 FBXW4P57775 412 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 GSTA3Q16772 222 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ACSBG2Q5FVE4 666 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 NEK5Q6P3R8 708 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ZNF781Q8N8C0 355 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 COL26A1Q96A83 441 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 PPCDCQ96CD2 204 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 MARK4Q96L34 752 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 HHIPQ96QV1 700 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 KLHL28Q9NXS3 571 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 POLR3HQ9Y535 204 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 CFAP20Q9Y6A4 193 aaKnown RBP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 OR10H2O60403 315 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ERAL1O75616 437 aaKnown RBP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 CBX6O95503 412 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ALDOAP04075 364 aaKnown RBP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 BDKRB1P46663 353 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 KCTD11Q693B1 232 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 CYB5D1Q6P9G0 228 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 GPR26Q8NDV2 337 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 PIH1D2Q8WWB5 315 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 LPGAT1Q92604 370 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 PIGKQ92643 395 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ZNF707Q96C28 371 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 VPS50Q96JG6 964 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ZNF556Q9HAH1 456 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ACSS2Q9NR19 701 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 TREX1Q9NSU2 369 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 SNX7Q9UNH6 387 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 SIT1Q9Y3P8 196 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ZNF780BQ9Y6R6 833 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 SIX3O95343 332 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 COX4I1P13073 169 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 FDXRP22570 491 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ALDH4A1P30038 563 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 SHMT2P34897 504 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ARHGAP8P85298 464 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 HSD11B1LQ7Z5J1 315 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ZNF614Q8N883 585 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 TTC29Q8NA56 475 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 VPS33AQ96AX1 596 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 TMEM245Q9H330 911 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 APOBEC3BQ9UH17 382 aaKnown RBP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ADGRE2Q9UHX3 823 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 STOML2Q9UJZ1 356 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 MYO1GB0I1T2 1018 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 GPR89AB7ZAQ6 455 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 GPR89BP0CG08 455 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 THEGLP0DJG4 465 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 PRPS2P11908 318 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 FOXN2P32314 431 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 BUD31P41223 144 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 HNRNPKP61978 463 aaKnown RBP eCLIP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ZNHIT3Q15649 155 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 TRMT5Q32P41 509 aaKnown RBP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 PTCHD3Q3KNS1 767 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ICE2Q659A1 982 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 BHLHA9Q7RTU4 235 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 ICA1LQ8NDH6 482 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 MAFAQ8NHW3 353 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 DTX3LQ8TDB6 740 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 NELL1Q92832 810 aa8.1□□□□□ -1.11
PTPRD-204ENST00000397606 GFM2Q969S9 779 aaKnown RBP8.1□□□□□ -1.11
PTPRD-204ENST00000397606 NSMCE2Q96MF7 247 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms