RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 CFAP61Q8NHU2 1237 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 GIMAP7Q8NHV1 300 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 AENQ8WTP8 325 aaKnown RBP16.11■□□□□ 0.17
CXCL1-201ENST00000395761 GRAMD1AQ96CP6 724 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 DPYSL5Q9BPU6 564 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 AARSD1Q9BTE6 412 aaKnown RBP16.11■□□□□ 0.17
CXCL1-201ENST00000395761 HGH1Q9BTY7 390 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 STRADBQ9C0K7 418 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 NRSN2Q9GZP1 204 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 CCDC68Q9H2F9 335 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 EPB41L1Q9H4G0 881 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 PDP2Q9P2J9 529 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 KLHL3Q9UH77 587 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 TSR3Q9UJK0 312 aaKnown RBP16.11■□□□□ 0.17
CXCL1-201ENST00000395761 SATB2Q9UPW6 733 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 RUVBL2Q9Y230 463 aaKnown RBP16.11■□□□□ 0.17
CXCL1-201ENST00000395761 ASF1AQ9Y294 204 aa16.11■□□□□ 0.17
CXCL1-201ENST00000395761 CCDC187A0A096LP49 1063 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 CCDC151A5D8V7 595 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 E5RI56 91 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 CAPN5O15484 640 aaPredicted RBP16.1■□□□□ 0.17
CXCL1-201ENST00000395761 HGFP14210 728 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 CYP4F3Q08477 520 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 GBX1Q14549 363 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 ACSBG2Q5FVE4 666 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 C3orf38Q5JPI3 329 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 FOXR1Q6PIV2 292 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 UNQ6494/PRO21346Q6UXR6 183 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 C3orf62Q6ZUJ4 267 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 GALNT7Q86SF2 657 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 OR52E1Q8NGJ3 308 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 WDR36Q8NI36 951 aaKnown RBP16.1■□□□□ 0.17
CXCL1-201ENST00000395761 GABPB2Q8TAK5 448 aaPredicted RBP16.1■□□□□ 0.17
CXCL1-201ENST00000395761 MDM1Q8TC05 714 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 HNRNPLLQ8WVV9 542 aaKnown RBP16.1■□□□□ 0.17
CXCL1-201ENST00000395761 LCN9Q8WX39 176 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 KCNJ9Q92806 393 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 CAVIN3Q969G5 261 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 LIN37Q96GY3 246 aaPredicted RBP16.1■□□□□ 0.17
CXCL1-201ENST00000395761 PRR11Q96HE9 360 aaPredicted RBP16.1■□□□□ 0.17
CXCL1-201ENST00000395761 TGM7Q96PF1 710 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 GPR21Q99679 349 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 TRIT1Q9H3H1 467 aaKnown RBP16.1■□□□□ 0.17
CXCL1-201ENST00000395761 XKR8Q9H6D3 395 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 LRRC4CQ9HCJ2 640 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 ZFATQ9P243 1243 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 NFS1Q9Y697 457 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 COMMD10Q9Y6G5 202 aa16.1■□□□□ 0.17
CXCL1-201ENST00000395761 TCRBV9S1A1TA0A576 114 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 OR6C74A6NCV1 312 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 OR5K3A6NET4 321 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 CXorf49A8MYA2 514 aaPredicted RBP16.09■□□□□ 0.17
CXCL1-201ENST00000395761 KIF1CO43896 1103 aaKnown RBP16.09■□□□□ 0.17
CXCL1-201ENST00000395761 C9P02748 559 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 CAPNS1P04632 268 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 LSSP48449 732 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 CDKN2DP55273 166 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 GABREP78334 506 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 RTP5Q14D33 572 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 TRMT10CQ7L0Y3 403 aaKnown RBP16.09■□□□□ 0.17
CXCL1-201ENST00000395761 RAB11FIP2Q7L804 512 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 STRA8Q7Z7C7 330 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 PLXDC1Q8IUK5 500 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 GSPT2Q8IYD1 628 aaKnown RBP16.09■□□□□ 0.17
CXCL1-201ENST00000395761 TBC1D21Q8IYX1 336 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 OR5K2Q8NHB8 316 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 SKA2Q8WVK7 121 aaPredicted RBP16.09■□□□□ 0.17
CXCL1-201ENST00000395761 CNTNAP3BQ96NU0 1288 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 CNTNAP3Q9BZ76 1288 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 SRMSQ9H3Y6 488 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 TFB2MQ9H5Q4 396 aaKnown RBP16.09■□□□□ 0.17
CXCL1-201ENST00000395761 POLR1BQ9H9Y6 1135 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 HRASLS2Q9NWW9 162 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 CIDEBQ9UHD4 219 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 PLAGL1Q9UM63 463 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 TDRKHQ9Y2W6 561 aaKnown RBP16.09■□□□□ 0.17
CXCL1-201ENST00000395761 DHRS7Q9Y394 339 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 LOXL2Q9Y4K0 774 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 AK5Q9Y6K8 562 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 MN1Q10571 1320 aaPredicted RBP16.09■□□□□ 0.17
CXCL1-201ENST00000395761 FRYQ5TBA9 3013 aa16.09■□□□□ 0.17
CXCL1-201ENST00000395761 BTN3A3O00478 584 aa16.08■□□□□ 0.16
CXCL1-201ENST00000395761 VPS26AO75436 327 aa16.08■□□□□ 0.16
CXCL1-201ENST00000395761 ERLIN1O75477 346 aa16.08■□□□□ 0.16
CXCL1-201ENST00000395761 SPAG6O75602 509 aa16.08■□□□□ 0.16
CXCL1-201ENST00000395761 C1QAP02745 245 aa16.08■□□□□ 0.16
CXCL1-201ENST00000395761 POLR2CP19387 275 aaPredicted RBP16.08■□□□□ 0.16
CXCL1-201ENST00000395761 PGGT1BP53609 377 aa16.08■□□□□ 0.16
CXCL1-201ENST00000395761 KIF26BQ2KJY2 2108 aa16.08■□□□□ 0.16
CXCL1-201ENST00000395761 UBAP2Q5T6F2 1119 aaKnown RBP16.08■□□□□ 0.16
CXCL1-201ENST00000395761 IRGCQ6NXR0 463 aa16.08■□□□□ 0.16
CXCL1-201ENST00000395761 FAM92BQ6ZTR7 304 aa16.08■□□□□ 0.16
CXCL1-201ENST00000395761 ARHGAP22Q7Z5H3 698 aa16.08■□□□□ 0.16
CXCL1-201ENST00000395761 FBXO39Q8N4B4 442 aa16.08■□□□□ 0.16
CXCL1-201ENST00000395761 CD200R1Q8TD46 325 aa16.08■□□□□ 0.16
CXCL1-201ENST00000395761 INPP5DQ92835 1189 aa16.08■□□□□ 0.16
CXCL1-201ENST00000395761 NXPE2Q96DL1 559 aa16.08■□□□□ 0.16
CXCL1-201ENST00000395761 CDC42EP4Q9H3Q1 356 aaKnown RBP16.08■□□□□ 0.16
CXCL1-201ENST00000395761 KLHL42Q9P2K6 505 aa16.08■□□□□ 0.16
CXCL1-201ENST00000395761 EPHA6Q9UF33 1036 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms