RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 SNAP91O60641 907 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 UROSP10746 265 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 SELPP16109 830 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 GTF2E2P29084 291 aaKnown RBP15.25■□□□□ 0.03
PTBP1-204ENST00000394601 CORO1AP31146 461 aaKnown RBP15.25■□□□□ 0.03
PTBP1-204ENST00000394601 CCT8P50990 548 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 PHC1P78364 1004 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 MEP1AQ16819 746 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 C18orf21Q32NC0 220 aaPredicted RBP15.25■□□□□ 0.03
PTBP1-204ENST00000394601 INTS11Q5TA45 600 aaKnown RBP15.25■□□□□ 0.03
PTBP1-204ENST00000394601 LETMD1Q6P1Q0 360 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 ANKS3Q6ZW76 656 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 TMEM150AQ86TG1 271 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 HS3ST5Q8IZT8 346 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 NKAPQ8N5F7 415 aaKnown RBP15.25■□□□□ 0.03
PTBP1-204ENST00000394601 GOLM1Q8NBJ4 401 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 NUDT8Q8WV74 236 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 OVCA2Q8WZ82 227 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 KCNJ9Q92806 393 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 TSEN34Q9BSV6 310 aaKnown RBP15.25■□□□□ 0.03
PTBP1-204ENST00000394601 PSME2Q9UL46 239 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 PCDHGA8Q9Y5G5 932 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 C2orf81A6NN90 581 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 ANKRD28O15084 1053 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 ASNA1O43681 348 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 VPS4BO75351 444 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 INMTO95050 263 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 KRT8P05787 483 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 PSMB9P28065 219 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 DAB2P98082 770 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 AAK1Q2M2I8 961 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 PLA2G4EQ3MJ16 856 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 PRMT9Q6P2P2 845 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 LINGO4Q6UY18 593 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 R3HCC1LQ7Z5L2 792 aaKnown RBP15.25■□□□□ 0.03
PTBP1-204ENST00000394601 SPATA19Q7Z5L4 167 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 PAPD5Q8NDF8 572 aaKnown RBP15.25■□□□□ 0.03
PTBP1-204ENST00000394601 ADAMTS19Q8TE59 1207 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 PLD4Q96BZ4 506 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 ALG14Q96F25 216 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 CDK5RAP1Q96SZ6 601 aaKnown RBP15.25■□□□□ 0.03
PTBP1-204ENST00000394601 FUNDC2Q9BWH2 189 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 TRIT1Q9H3H1 467 aaKnown RBP15.25■□□□□ 0.03
PTBP1-204ENST00000394601 PARVBQ9HBI1 364 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 PLXNB3Q9ULL4 1909 aa15.25■□□□□ 0.03
PTBP1-204ENST00000394601 C2orf78A6NCI8 922 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 NDUFS3O75489 264 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 PLA2G16P53816 162 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 AQP6Q13520 282 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 LAPTM5Q13571 262 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 SPATS1Q496A3 300 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.24■□□□□ 0.034e-8■■■□□ 15.6
PTBP1-204ENST00000394601 SBSNQ6UWP8 590 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 TRIM54Q9BYV2 358 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 IL17CQ9P0M4 197 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 CAB39Q9Y376 341 aaPredicted RBP15.24■□□□□ 0.03
PTBP1-204ENST00000394601 UGT2A1Q9Y4X1 527 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 CCL27Q9Y4X3 112 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 A0A1B0GVM2 712 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 CBX4O00257 560 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 OR7A17O14581 309 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 BCAS1O75363 584 aaPredicted RBP15.24■□□□□ 0.03
PTBP1-204ENST00000394601 HRH2P25021 359 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 SLC11A2P49281 568 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 PYCR3Q53H96 274 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 C6orf136Q5SQH8 315 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 ADGRF1Q5T601 910 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 TMEM199Q8N511 208 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 OR10Q1Q8NGQ4 319 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 LINGO1Q96FE5 620 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 TMEM74Q96NL1 305 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 CDK15Q96Q40 435 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 ARPC5LQ9BPX5 153 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 TMEM175Q9BSA9 504 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 BEX2Q9BXY8 128 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 TRPV5Q9NQA5 729 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 EIF2B4Q9UI10 523 aaKnown RBP15.24■□□□□ 0.03
PTBP1-204ENST00000394601 ZSCAN5BA6NJL1 495 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 SOBPA7XYQ1 873 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 H7C4K7 107 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 ARVCFO00192 962 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 GNGT2O14610 69 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 ANGPT2O15123 496 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 AXIN1O15169 862 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 IDH3BO43837 385 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 ALOX12P18054 663 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 AGXTP21549 392 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 RPS9P46781 194 aaKnown RBP15.24■□□□□ 0.03
PTBP1-204ENST00000394601 TTPAP49638 278 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 GSK3BP49841 420 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 BNIP2Q12982 314 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 CAMK2BQ13554 666 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 FAM209AQ5JX71 171 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 RNF219Q5W0B1 726 aaPredicted RBP15.24■□□□□ 0.03
PTBP1-204ENST00000394601 TXNDC11Q6PKC3 985 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 TBPL2Q6SJ96 375 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 DLEU7Q6UYE1 221 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 C16orf59Q7L2K0 433 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 SPRED1Q7Z699 444 aa15.24■□□□□ 0.03
PTBP1-204ENST00000394601 RALGPS2Q86X27 583 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms