RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 GTSE1Q9NYZ3 720 aa22.73■■□□□ 1.23
RARA-204ENST00000394089 RNF112Q9ULX5 631 aa22.73■■□□□ 1.23
RARA-204ENST00000394089 AP4S1Q9Y587 144 aa22.73■■□□□ 1.23
RARA-204ENST00000394089 RANBP2P49792 3224 aaKnown RBP22.73■■□□□ 1.23
RARA-204ENST00000394089 TBC1D3BA6NDS4 549 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 SYCE1LA8MT33 242 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 UBXN8O00124 270 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 HDAC3O15379 428 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 ECI2O75521 394 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 NSG1P42857 185 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 HERVK_113P63132 956 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 TSNQ15631 228 aaKnown RBP22.72■■□□□ 1.23
RARA-204ENST00000394089 PARM1Q6UWI2 310 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 HSD11B1LQ7Z5J1 315 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 RAB44Q7Z6P3 723 aaPredicted RBP22.72■■□□□ 1.23
RARA-204ENST00000394089 TNIP2Q8NFZ5 429 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 ERVK-6Q9BXR3 956 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 GSTO2Q9H4Y5 243 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 RPF2Q9H7B2 306 aaKnown RBP22.72■■□□□ 1.23
RARA-204ENST00000394089 SARS2Q9NP81 518 aaKnown RBP22.72■■□□□ 1.23
RARA-204ENST00000394089 UTP6Q9NYH9 597 aaKnown RBP22.72■■□□□ 1.23
RARA-204ENST00000394089 TMEM9Q9P0T7 183 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 PACSIN3Q9UKS6 424 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 DOCK8Q8NF50 2099 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 IGLV3-16A0A075B6K0 115 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 CDC7O00311 574 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 HLA-EP13747 358 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 MTHFRP42898 656 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 DLX2Q07687 328 aaPredicted RBP22.72■■□□□ 1.23
RARA-204ENST00000394089 NHSL2Q5HYW2 709 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 COL13A1Q5TAT6 717 aaPredicted RBP22.72■■□□□ 1.23
RARA-204ENST00000394089 IL23RQ5VWK5 629 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 SEL1L3Q68CR1 1132 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 ERAP2Q6P179 960 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 PARS2Q7L3T8 475 aaKnown RBP22.72■■□□□ 1.23
RARA-204ENST00000394089 PTGR2Q8N8N7 351 aaPredicted RBP22.72■■□□□ 1.23
RARA-204ENST00000394089 FUBP1Q96AE4 644 aaKnown RBP22.72■■□□□ 1.23
RARA-204ENST00000394089 RCN3Q96D15 328 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 COPS8Q99627 209 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 PAIP1Q9H074 479 aaKnown RBP22.72■■□□□ 1.23
RARA-204ENST00000394089 ZNF576Q9H609 170 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 SMOXQ9NWM0 555 aa22.72■■□□□ 1.23
RARA-204ENST00000394089 BTN3A1O00481 513 aa22.71■■□□□ 1.23
RARA-204ENST00000394089 GRID2O43424 1007 aa22.71■■□□□ 1.23
RARA-204ENST00000394089 MMP12P39900 470 aa22.71■■□□□ 1.23
RARA-204ENST00000394089 RHDQ02161 417 aa22.71■■□□□ 1.23
RARA-204ENST00000394089 ELAVL3Q14576 367 aaKnown RBP22.71■■□□□ 1.23
RARA-204ENST00000394089 UNC50Q53HI1 259 aa22.71■■□□□ 1.23
RARA-204ENST00000394089 NANOGP8Q6NSW7 305 aa22.71■■□□□ 1.23
RARA-204ENST00000394089 SFTPA1Q8IWL2 248 aa22.71■■□□□ 1.23
RARA-204ENST00000394089 CLDN19Q8N6F1 224 aa22.71■■□□□ 1.23
RARA-204ENST00000394089 PACRGLQ8N7B6 248 aa22.71■■□□□ 1.23
RARA-204ENST00000394089 FGF14Q92915 247 aa22.71■■□□□ 1.23
RARA-204ENST00000394089 EXT2Q93063 718 aa22.71■■□□□ 1.23
RARA-204ENST00000394089 FAM83DQ9H4H8 585 aa22.71■■□□□ 1.23
RARA-204ENST00000394089 EFCAB1Q9HAE3 211 aa22.71■■□□□ 1.23
RARA-204ENST00000394089 LATS2Q9NRM7 1088 aa22.71■■□□□ 1.23
RARA-204ENST00000394089 SARDHQ9UL12 918 aa22.71■■□□□ 1.23
RARA-204ENST00000394089 TMEM98Q9Y2Y6 226 aa22.71■■□□□ 1.23
RARA-204ENST00000394089 NPEPPSL1A6NEC2 478 aa22.7■■□□□ 1.23
RARA-204ENST00000394089 KPNA3O00505 521 aaPredicted RBP22.7■■□□□ 1.23
RARA-204ENST00000394089 KLK8O60259 260 aa22.7■■□□□ 1.23
RARA-204ENST00000394089 CDH3P22223 829 aa22.7■■□□□ 1.23
RARA-204ENST00000394089 ITGB7P26010 798 aa22.7■■□□□ 1.23
RARA-204ENST00000394089 GDI1P31150 447 aa22.7■■□□□ 1.23
RARA-204ENST00000394089 TRAP1Q12931 704 aaKnown RBP22.7■■□□□ 1.23
RARA-204ENST00000394089 PPP4R4Q6NUP7 873 aa22.7■■□□□ 1.23
RARA-204ENST00000394089 ANKFN1Q8N957 763 aa22.7■■□□□ 1.23
RARA-204ENST00000394089 MFSD2AQ8NA29 543 aa22.7■■□□□ 1.23
RARA-204ENST00000394089 AGR3Q8TD06 166 aa22.7■■□□□ 1.23
RARA-204ENST00000394089 TFAP2CQ92754 450 aa22.7■■□□□ 1.23
RARA-204ENST00000394089 CHFRQ96EP1 664 aa22.7■■□□□ 1.23
RARA-204ENST00000394089 KLHL42Q9P2K6 505 aa22.7■■□□□ 1.23
RARA-204ENST00000394089 THAP10Q9P2Z0 257 aaPredicted RBP22.7■■□□□ 1.23
RARA-204ENST00000394089 K7EPI3 171 aa22.7■■□□□ 1.22
RARA-204ENST00000394089 KAT7O95251 611 aa22.7■■□□□ 1.22
RARA-204ENST00000394089 SLC25A14O95258 325 aaPredicted RBP22.7■■□□□ 1.22
RARA-204ENST00000394089 ZBTB11O95625 1053 aaPredicted RBP22.7■■□□□ 1.22
RARA-204ENST00000394089 TFPTP0C1Z6 253 aa22.7■■□□□ 1.22
RARA-204ENST00000394089 ITPRIPL2Q3MIP1 535 aa22.7■■□□□ 1.22
RARA-204ENST00000394089 SERPINA13PQ6UXR4 307 aa22.7■■□□□ 1.22
RARA-204ENST00000394089 RAVER1Q8IY67 606 aaKnown RBP22.7■■□□□ 1.22
RARA-204ENST00000394089 LKAAEAR1Q8TD35 194 aa22.7■■□□□ 1.22
RARA-204ENST00000394089 TRUB1Q8WWH5 349 aaKnown RBP22.7■■□□□ 1.22
RARA-204ENST00000394089 THAP11Q96EK4 314 aa22.7■■□□□ 1.22
RARA-204ENST00000394089 FAR2Q96K12 515 aa22.7■■□□□ 1.22
RARA-204ENST00000394089 FAM129BQ96TA1 746 aa22.7■■□□□ 1.22
RARA-204ENST00000394089 TRMT61BQ9BVS5 477 aaKnown RBP22.7■■□□□ 1.22
RARA-204ENST00000394089 TMPRSS11EQ9UL52 423 aa22.7■■□□□ 1.22
RARA-204ENST00000394089 TCRBV3S1A0A5B6 114 aa22.69■■□□□ 1.22
RARA-204ENST00000394089 SUPT3HB4E1H0 165 aa22.69■■□□□ 1.22
RARA-204ENST00000394089 H3BMQ9 156 aa22.69■■□□□ 1.22
RARA-204ENST00000394089 ATE1O95260 518 aa22.69■■□□□ 1.22
RARA-204ENST00000394089 GFAPP14136 432 aa22.69■■□□□ 1.22
RARA-204ENST00000394089 HNRNPLP14866 589 aaKnown RBP eCLIP22.69■■□□□ 1.22
RARA-204ENST00000394089 PKNOX1P55347 436 aa22.69■■□□□ 1.22
RARA-204ENST00000394089 CRY1Q16526 586 aa22.69■■□□□ 1.22
RARA-204ENST00000394089 NRF1Q16656 503 aa22.69■■□□□ 1.22
RARA-204ENST00000394089 PFKFB4Q16877 469 aa22.69■■□□□ 1.22
RARA-204ENST00000394089 POM121L1PQ3SYA9 428 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms