RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 C16orf72Q14CZ0 275 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 TTLL9Q3SXZ7 439 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 IRGCQ6NXR0 463 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 UNC5DQ6UXZ4 953 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 ARHGAP22Q7Z5H3 698 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 OOSP2Q86WS3 158 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 AGBL5Q8NDL9 886 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 OR52E1Q8NGJ3 308 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 KCNJ9Q92806 393 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 C9orf72Q96LT7 481 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 FOPNLQ96NB1 174 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 HGH1Q9BTY7 390 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 FAM129AQ9BZQ8 928 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 SRMSQ9H3Y6 488 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 GALPQ9UBC7 116 aa18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 TDRKHQ9Y2W6 561 aaKnown RBP18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 MN1Q10571 1320 aaPredicted RBP18.48■□□□□ 0.55
PDLIM7-204ENST00000393546 ACACBO00763 2458 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 OR5K3A6NET4 321 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 VPS26AO75436 327 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 GSTA2P09210 222 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 GABRB3P28472 473 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 ATP5DP30049 168 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 SSTR1P30872 391 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 MLLT3P42568 568 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 CLCN7P51798 805 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 GFERP55789 205 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 PRKAA1Q13131 559 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 DNTTIP2Q5QJE6 756 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 UGT3A1Q6NUS8 523 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 TTC23LQ6PF05 361 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 IGF2-ASQ6U949 168 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 CAPN12Q6ZSI9 719 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 CEP128Q6ZU80 1094 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 C3orf62Q6ZUJ4 267 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 AMIGO1Q86WK6 493 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 KDF1Q8NAX2 398 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 IFT81Q8WYA0 676 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 INPP5DQ92835 1189 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 PRR11Q96HE9 360 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 SLC46A1Q96NT5 459 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 ZDHHC18Q9NUE0 388 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 NSMCE4AQ9NXX6 385 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 MTRF1LQ9UGC7 380 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 DHRS7Q9Y394 339 aa18.47■□□□□ 0.55
PDLIM7-204ENST00000393546 TOX3O15405 576 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 RASSF9O75901 435 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 DXOO77932 396 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 TNFSF15O95150 251 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 CAPNS1P04632 268 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 HGFP14210 728 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 GBX1Q14549 363 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 ACSBG2Q5FVE4 666 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 CACHD1Q5VU97 1274 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 FAM92BQ6ZTR7 304 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 CYS1Q717R9 158 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 SLC26A11Q86WA9 606 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 SIDT2Q8NBJ9 832 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 ZCCHC14Q8WYQ9 949 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 CDKL2Q92772 493 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 ZNF578Q96N58 590 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 GPR21Q99679 349 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 TSPYL1Q9H0U9 437 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 TAS2R13Q9NYV9 303 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 SLC17A6Q9P2U8 582 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 PISDQ9UG56 409 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 CORO1CQ9ULV4 474 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 MED16Q9Y2X0 877 aa18.46■□□□□ 0.55
PDLIM7-204ENST00000393546 MATN2O00339 956 aa18.45■□□□□ 0.54
PDLIM7-204ENST00000393546 ANKRD34CP0C6C1 535 aa18.45■□□□□ 0.54
PDLIM7-204ENST00000393546 POLR2CP19387 275 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-204ENST00000393546 SHMT2P34897 504 aa18.45■□□□□ 0.54
PDLIM7-204ENST00000393546 SKIV2L2P42285 1042 aaKnown RBP18.45■□□□□ 0.54
PDLIM7-204ENST00000393546 ERVPABLB-1P60509 514 aa18.45■□□□□ 0.54
PDLIM7-204ENST00000393546 KLHL38Q2WGJ6 581 aa18.45■□□□□ 0.54
PDLIM7-204ENST00000393546 STRA8Q7Z7C7 330 aa18.45■□□□□ 0.54
PDLIM7-204ENST00000393546 DCUN1D3Q8IWE4 304 aa18.45■□□□□ 0.54
PDLIM7-204ENST00000393546 CD180Q99467 661 aa18.45■□□□□ 0.54
PDLIM7-204ENST00000393546 NDNQ99608 321 aa18.45■□□□□ 0.54
PDLIM7-204ENST00000393546 SLC30A3Q99726 388 aa18.45■□□□□ 0.54
PDLIM7-204ENST00000393546 XKR8Q9H6D3 395 aa18.45■□□□□ 0.54
PDLIM7-204ENST00000393546 THSD1Q9NS62 852 aa18.45■□□□□ 0.54
PDLIM7-204ENST00000393546 TRMT6Q9UJA5 497 aaKnown RBP18.45■□□□□ 0.54
PDLIM7-204ENST00000393546 PMS2P1A4D2B8 440 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 EFCAB7A8K855 629 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 ZNF500O60304 480 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 ITGA2BP08514 1039 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 CBSLP0DN79 551 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 CCL4P13236 92 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 ENO3P13929 434 aaPredicted RBP18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 CBSP35520 551 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 CCNFP41002 786 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 ABCG1P45844 678 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 MAPK10P53779 464 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 ILF2Q12905 390 aaKnown RBP18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 TBC1D25Q3MII6 688 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 NEK10Q6ZWH5 1172 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 PRSS42Q7Z5A4 293 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 MAGEC3Q8TD91 643 aa18.44■□□□□ 0.54
PDLIM7-204ENST00000393546 FGF11Q92914 225 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms