RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 BRD3Q15059 726 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 KBTBD12Q3ZCT8 623 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 CCDC157Q569K6 752 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 WDR93Q6P2C0 686 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 TMEM71Q6P5X7 295 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 CCNI2Q6ZMN8 369 aaPredicted RBP6.59□□□□□ -1.35
UBBP1-201ENST00000392399 CAPN12Q6ZSI9 719 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 MTERF4Q7Z6M4 381 aaKnown RBP6.59□□□□□ -1.35
UBBP1-201ENST00000392399 PACS2Q86VP3 889 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 ZC3HC1Q86WB0 502 aaKnown RBP6.59□□□□□ -1.35
UBBP1-201ENST00000392399 PLXDC1Q8IUK5 500 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 CTAGE3PQ8IX95 158 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 CHCHD4Q8N4Q1 142 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 DCBLD1Q8N8Z6 715 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 Q8N9G6 341 aaPredicted RBP6.59□□□□□ -1.35
UBBP1-201ENST00000392399 LRRN4CLQ8ND94 238 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 OR4D9Q8NGE8 314 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 OR5K2Q8NHB8 316 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 LKAAEAR1Q8TD35 194 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 RAD51AP1Q96B01 352 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 TSPAN17Q96FV3 270 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 PDLIM5Q96HC4 596 aaKnown RBP6.59□□□□□ -1.35
UBBP1-201ENST00000392399 RMDN2Q96LZ7 410 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 DEPDC7Q96QD5 511 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 GPR21Q99679 349 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 MCMBPQ9BTE3 642 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 TRIT1Q9H3H1 467 aaKnown RBP6.59□□□□□ -1.35
UBBP1-201ENST00000392399 CDC42EP4Q9H3Q1 356 aaKnown RBP6.59□□□□□ -1.35
UBBP1-201ENST00000392399 POPDC3Q9HBV1 291 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 SYTL2Q9HCH5 934 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 NINJ2Q9NZG7 142 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 PDP2Q9P2J9 529 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 EPHA6Q9UF33 1036 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 SLC24A2Q9UI40 661 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 TRMT6Q9UJA5 497 aaKnown RBP6.59□□□□□ -1.35
UBBP1-201ENST00000392399 RAB21Q9UL25 225 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 MED16Q9Y2X0 877 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 NEUROG3Q9Y4Z2 214 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 UNC13CQ8NB66 2214 aa6.59□□□□□ -1.35
UBBP1-201ENST00000392399 A0A087WUV0 522 aaPredicted RBP6.58□□□□□ -1.36
UBBP1-201ENST00000392399 CCDC151A5D8V7 595 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 CXorf49A8MYA2 514 aaPredicted RBP6.58□□□□□ -1.36
UBBP1-201ENST00000392399 D6RAR5 112 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 GFYI3L273 518 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 ZBTB14O43829 449 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 PROS1P07225 676 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 ABHD2P08910 425 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 H2AFXP16104 143 aaPredicted RBP6.58□□□□□ -1.36
UBBP1-201ENST00000392399 FDXRP22570 491 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 CNTFP26441 200 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 CCKBRP32239 447 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 SHMT2P34897 504 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 HSD17B2P37059 387 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 LIMK2P53671 638 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 PMS2P54278 862 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 SLC12A2P55011 1212 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 INHBCP55103 352 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 IL2P60568 153 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 ZFP36L1Q07352 338 aaKnown RBP6.58□□□□□ -1.36
UBBP1-201ENST00000392399 FOXC1Q12948 553 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 ABRQ12979 859 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 TARDBPQ13148 414 aaKnown RBP eCLIP6.58□□□□□ -1.36
UBBP1-201ENST00000392399 EIF3IQ13347 325 aaKnown RBP6.58□□□□□ -1.36
UBBP1-201ENST00000392399 PLCL1Q15111 1095 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 ISXQ2M1V0 245 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 KLHL38Q2WGJ6 581 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 AMZ1Q400G9 498 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 ACSBG2Q5FVE4 666 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 HES3Q5TGS1 186 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 HECTD2Q5U5R9 776 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 NAPRTQ6XQN6 538 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 CYHR1Q6ZMK1 362 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 USP53Q70EK8 1073 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 CCDC91Q7Z6B0 441 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 AMIGO1Q86WK6 493 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 OOSP2Q86WS3 158 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 VRK3Q8IV63 474 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 DCUN1D3Q8IWE4 304 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 CARFQ8N187 725 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 RAB42Q8N4Z0 105 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 NKAPQ8N5F7 415 aaKnown RBP6.58□□□□□ -1.36
UBBP1-201ENST00000392399 PPM1NQ8N819 430 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 GPATCH11Q8N954 259 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 SIDT2Q8NBJ9 832 aaKnown RBP6.58□□□□□ -1.36
UBBP1-201ENST00000392399 FBXO15Q8NCQ5 510 aaPredicted RBP6.58□□□□□ -1.36
UBBP1-201ENST00000392399 CD200R1Q8TD46 325 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 SKA2Q8WVK7 121 aaPredicted RBP6.58□□□□□ -1.36
UBBP1-201ENST00000392399 LCN9Q8WX39 176 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 ASB11Q8WXH4 323 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 NCSTNQ92542 709 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 SLC22A18Q96BI1 424 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 ZDHHC12Q96GR4 267 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 CD180Q99467 661 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 NDNQ99608 321 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 RBBP8Q99708 897 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 CCDC77Q9BR77 488 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 SCNM1Q9BWG6 230 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 RAB11FIP5Q9BXF6 653 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 TBC1D10AQ9BXI6 508 aa6.58□□□□□ -1.36
UBBP1-201ENST00000392399 TXLNGYQ9BZA5 131 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms