RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 UBXN7O94888 489 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 SEC31AO94979 1220 aaKnown RBP9.01□□□□□ -0.97
HMGN1-202ENST00000380747 HGFP14210 728 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 PGAM1P18669 254 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 RBMS1P29558 406 aaKnown RBP9.01□□□□□ -0.97
HMGN1-202ENST00000380747 PDHA2P29803 388 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 FMO4P31512 558 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 CCKBRP32239 447 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 CCR7P32248 378 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 MAGEA3P43357 314 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 RPL21P46778 160 aaKnown RBP9.01□□□□□ -0.97
HMGN1-202ENST00000380747 ARCN1P48444 511 aaKnown RBP9.01□□□□□ -0.97
HMGN1-202ENST00000380747 LSSP48449 732 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 LIMK2P53671 638 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 ARL4CP56559 192 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 RHDQ02161 417 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 ZFP36L1Q07352 338 aaKnown RBP9.01□□□□□ -0.97
HMGN1-202ENST00000380747 RPA4Q13156 261 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 SQSTM1Q13501 440 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 C16orf72Q14CZ0 275 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 LONRF1Q17RB8 773 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 HP1BP3Q5SSJ5 553 aaPredicted RBP9.01□□□□□ -0.97
HMGN1-202ENST00000380747 RNF187Q5TA31 235 aaPredicted RBP9.01□□□□□ -0.97
HMGN1-202ENST00000380747 CAPRIN2Q6IMN6 1127 aaKnown RBP9.01□□□□□ -0.97
HMGN1-202ENST00000380747 HIBCHQ6NVY1 386 aaPredicted RBP9.01□□□□□ -0.97
HMGN1-202ENST00000380747 TMEM71Q6P5X7 295 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 ZNF574Q6ZN55 896 aaPredicted RBP9.01□□□□□ -0.97
HMGN1-202ENST00000380747 TMEM135Q86UB9 458 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 PDIK1LQ8N165 341 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 KRT222Q8N1A0 295 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 RCBTB1Q8NDN9 531 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 PHC3Q8NDX5 983 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 OR4D9Q8NGE8 314 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 LKAAEAR1Q8TD35 194 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 TMEM159Q96B96 161 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 CFAP36Q96G28 342 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 LIN37Q96GY3 246 aaPredicted RBP9.01□□□□□ -0.97
HMGN1-202ENST00000380747 FERD3LQ96RJ6 166 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 OR52A5Q9H2C5 316 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 EPB41L1Q9H4G0 881 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 PISDQ9UG56 409 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 GNPTGQ9UJJ9 305 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 CDC23Q9UJX2 597 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 HEBP2Q9Y5Z4 205 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 COLEC10Q9Y6Z7 277 aa9.01□□□□□ -0.97
HMGN1-202ENST00000380747 ZCWPW2A0A1B0GU75 182 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 NDC80O14777 642 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 PLD2O14939 933 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 TNFSF15O95150 251 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 TUBB4AP04350 444 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 APOA4P06727 396 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 F7P08709 466 aaPredicted RBP9□□□□□ -0.97
HMGN1-202ENST00000380747 JMJD7P0C870 316 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 THRAP10827 490 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 OGNP20774 298 aaKnown RBP9□□□□□ -0.97
HMGN1-202ENST00000380747 NDUFS1P28331 727 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 ELK3P41970 407 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 UCNP55089 124 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 GFERP55789 205 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 HSPA14Q0VDF9 509 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 CALCOCO2Q13137 446 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 EIF3IQ13347 325 aaKnown RBP9□□□□□ -0.97
HMGN1-202ENST00000380747 TMED2Q15363 201 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 HIF1AQ16665 826 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 WHAMMP3Q1A5X7 153 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 TYSND1Q2T9J0 566 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 TBC1D25Q3MII6 688 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 ZNF658BQ4V348 819 aaPredicted RBP9□□□□□ -0.97
HMGN1-202ENST00000380747 ZNF470Q6ECI4 717 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 CENPUQ71F23 418 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 LRRC6Q86X45 466 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 PLXDC1Q8IUK5 500 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 LSMEM2Q8N112 164 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 BBOF1Q8ND07 529 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 LPGAT1Q92604 370 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 RSC1A1Q92681 617 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 TFGQ92734 400 aaPredicted RBP9□□□□□ -0.97
HMGN1-202ENST00000380747 HPS1Q92902 700 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 TGM7Q96PF1 710 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 PANX3Q96QZ0 392 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 TCF12Q99081 682 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 CMKLR1Q99788 373 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 EBNA1BP2Q99848 306 aaKnown RBP9□□□□□ -0.97
HMGN1-202ENST00000380747 ERP44Q9BS26 406 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 NAT9Q9BTE0 207 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 HGH1Q9BTY7 390 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 CARD6Q9BX69 1037 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 P2RY12Q9H244 342 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 IARS2Q9NSE4 1012 aaKnown RBP9□□□□□ -0.97
HMGN1-202ENST00000380747 OGFRQ9NZT2 677 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 SLC24A2Q9UI40 661 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 CHMP2BQ9UQN3 213 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 CRYL1Q9Y2S2 319 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 FAM169AQ9Y6X4 670 aa9□□□□□ -0.97
HMGN1-202ENST00000380747 SLC5A10A0PJK1 596 aa8.99□□□□□ -0.97
HMGN1-202ENST00000380747 KIF2AO00139 706 aaPredicted RBP8.99□□□□□ -0.97
HMGN1-202ENST00000380747 CAPN5O15484 640 aaPredicted RBP8.99□□□□□ -0.97
HMGN1-202ENST00000380747 ITIH1P19827 911 aa8.99□□□□□ -0.97
HMGN1-202ENST00000380747 CHRM3P20309 590 aa8.99□□□□□ -0.97
HMGN1-202ENST00000380747 RPS3P23396 243 aaKnown RBP eCLIP8.99□□□□□ -0.971e-8■□□□□ 8.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms