RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 PANX1Q96RD7 426 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 DPH2Q9BQC3 489 aaPredicted RBP10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 MCMBPQ9BTE3 642 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 MRPS26Q9BYN8 205 aaKnown RBP10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 PNPLA3Q9NST1 481 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 COMMD8Q9NX08 183 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 SPG21Q9NZD8 308 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 MED16Q9Y2X0 877 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 DEAF1O75398 565 aaPredicted RBP10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 PGLSO95336 258 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 FTH1P02794 183 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 OPN1SWP03999 348 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 CYP4F2P78329 520 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 CHIT1Q13231 466 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 DYNC1I2Q13409 638 aaKnown RBP10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 IER5LQ5T953 404 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 LHX8Q68G74 356 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 NCEH1Q6PIU2 408 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 XKR5Q6UX68 686 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 TMEM26Q6ZUK4 368 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 USP45Q70EL2 814 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 EFL1Q7Z2Z2 1120 aaKnown RBP10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 ATG16L2Q8NAA4 619 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 SH3KBP1Q96B97 665 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 ROPN1LQ96C74 230 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 CENPNQ96H22 339 aaPredicted RBP10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 SDR39U1Q9NRG7 319 aaPredicted RBP10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 B4GALT6Q9UBX8 382 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 EBF1Q9UH73 591 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 SLC25A13Q9UJS0 675 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 SNX8Q9Y5X2 465 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 GPR45Q9Y5Y3 372 aa10.73□□□□□ -0.69
DNMT3A-203ENST00000380746 IFRD1O00458 451 aaPredicted RBP10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 E2F3O00716 465 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 RFXANKO14593 260 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 ANXA6P08133 673 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 COX7A2P14406 83 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 ZNF24P17028 368 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 POU1F1P28069 291 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 ETV3P41162 512 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 TM4SF4P48230 202 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 ATP1A4Q13733 1029 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 ARSIQ5FYB1 569 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 TXNDC11Q6PKC3 985 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 DTWD1Q8N5C7 304 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 SPPL2AQ8TCT8 520 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 PXYLP1Q8TE99 480 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 KCNJ9Q92806 393 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 PLD4Q96BZ4 506 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 ASAH2Q9NR71 780 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 AIG1Q9NVV5 245 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 MTRRQ9UBK8 725 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 RSL24D1Q9UHA3 163 aaKnown RBP10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 DHRS7Q9Y394 339 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 ZNF451Q9Y4E5 1061 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 TNPO3Q9Y5L0 923 aaKnown RBP10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 A0A0G2JN53 185 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 EVPLLA8MZ36 301 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 TRMUO75648 421 aaKnown RBP10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 SERPINA1P01009 418 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 OR56A5P0C7T3 313 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 TACR1P25103 407 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 ALDH9A1P49189 494 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 XIAPP98170 497 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 EIF4EBP2Q13542 120 aaPredicted RBP10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 PLEKHG6Q3KR16 790 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 PRMT9Q6P2P2 845 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 TMEM199Q8N511 208 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 TMCO5AQ8N6Q1 288 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 ZNF555Q8NEP9 628 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 TRPV3Q8NET8 790 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 BRD9Q9H8M2 597 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 PDFQ9HBH1 243 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 ELOVL2Q9NXB9 296 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 SPATA7Q9P0W8 599 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 TRAV19A0A0A6YYK7 116 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 TBC1D4O60343 1298 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 HOXB8P17481 243 aaPredicted RBP10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 SETMARQ53H47 684 aaPredicted RBP10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 OGFOD2Q6N063 350 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 TBPL2Q6SJ96 375 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 SPATA19Q7Z5L4 167 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 MARVELD2Q8N4S9 558 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 RHEBL1Q8TAI7 183 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 SGCDQ92629 289 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 TMEM125Q96AQ2 219 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 TMEM159Q96B96 161 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 ZFRQ96KR1 1074 aaKnown RBP10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 TRIB3Q96RU7 358 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 INPP5KQ9BT40 448 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 VN1R3Q9BXE9 311 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 NAA50Q9GZZ1 169 aaKnown RBP10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 SMPD3Q9NY59 655 aaPredicted RBP10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 RAPGEFL1Q9UHV5 662 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 MBD1Q9UIS9 605 aaPredicted RBP10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 SNX5Q9Y5X3 404 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 COMMD3-BMI1R4GMX3 469 aa10.72□□□□□ -0.69
DNMT3A-203ENST00000380746 SMIM31A0A1B0GVY4 71 aa10.71□□□□□ -0.69
DNMT3A-203ENST00000380746 A0A1W2PPW3 197 aa10.71□□□□□ -0.69
DNMT3A-203ENST00000380746 FXYD1O00168 92 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms