RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 PIH1D1Q9NWS0 290 aaKnown RBP16.35■□□□□ 0.21
SMN2-201ENST00000380741 PCDHGA9Q9Y5G4 932 aaKnown RBP16.35■□□□□ 0.21
SMN2-201ENST00000380741 SNRNP200O75643 2136 aaKnown RBP16.34■□□□□ 0.21
SMN2-201ENST00000380741 C2orf74A8MZ97 194 aa16.34■□□□□ 0.21
SMN2-201ENST00000380741 ZNF189O75820 626 aaPredicted RBP16.34■□□□□ 0.21
SMN2-201ENST00000380741 CAPN1P07384 714 aa16.34■□□□□ 0.21
SMN2-201ENST00000380741 CYP2A7P20853 494 aa16.34■□□□□ 0.21
SMN2-201ENST00000380741 CACNG1Q06432 222 aa16.34■□□□□ 0.21
SMN2-201ENST00000380741 RPA4Q13156 261 aa16.34■□□□□ 0.21
SMN2-201ENST00000380741 PRKG2Q13237 762 aa16.34■□□□□ 0.21
SMN2-201ENST00000380741 DBN1Q16643 649 aa16.34■□□□□ 0.21
SMN2-201ENST00000380741 NADK2Q4G0N4 442 aa16.34■□□□□ 0.21
SMN2-201ENST00000380741 FAM198BQ6UWH4 519 aa16.34■□□□□ 0.21
SMN2-201ENST00000380741 ADGRF3Q8IZF5 1079 aa16.34■□□□□ 0.21
SMN2-201ENST00000380741 TFGQ92734 400 aaPredicted RBP16.34■□□□□ 0.21
SMN2-201ENST00000380741 CDKN2AIPNLQ96HQ2 116 aa16.34■□□□□ 0.21
SMN2-201ENST00000380741 TCFL5Q9UL49 500 aa16.34■□□□□ 0.21
SMN2-201ENST00000380741 SPTBN1Q01082 2364 aaKnown RBP16.34■□□□□ 0.21
SMN2-201ENST00000380741 PCSK5Q92824 1860 aa16.33■□□□□ 0.21
SMN2-201ENST00000380741 CCDC88CQ9P219 2028 aa16.33■□□□□ 0.21
SMN2-201ENST00000380741 SHANK1Q9Y566 2161 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 GOLGA6L9A6NEM1 432 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 TTLL8A6PVC2 850 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 MAP3K7O43318 606 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 AP2A2O94973 939 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 PTMAP06454 111 aaKnown RBP16.33■□□□□ 0.2
SMN2-201ENST00000380741 ZNF75DP51815 510 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 VAV2P52735 878 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 GDF10P55107 478 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 PTCHD3Q3KNS1 767 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 PAPD7Q5XG87 772 aaKnown RBP16.33■□□□□ 0.2
SMN2-201ENST00000380741 ZNF449Q6P9G9 518 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 CDHR3Q6ZTQ4 885 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 STYXQ8WUJ0 223 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 ACTR10Q9NZ32 417 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 SMARCAL1Q9NZC9 954 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 AMFRQ9UKV5 643 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 PACSIN2Q9UNF0 486 aaPredicted RBP16.33■□□□□ 0.2
SMN2-201ENST00000380741 ICKQ9UPZ9 632 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 PRSS21Q9Y6M0 314 aa16.33■□□□□ 0.2
SMN2-201ENST00000380741 CCDC78A2IDD5 438 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 E7EQ34 232 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 ZNF749O43361 778 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 CEACAM4O75871 244 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 TMEM63AO94886 807 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 AP2A1O95782 977 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 GSTM1P09488 218 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 UQCRFS1P47985 274 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 ITGA1P56199 1179 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 GSTM4Q03013 218 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 KLF1Q13351 362 aaPredicted RBP16.32■□□□□ 0.2
SMN2-201ENST00000380741 NCF4Q15080 339 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 P3H1Q32P28 736 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 SPESP1Q6UW49 350 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 PEX26Q7Z412 305 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 TAB3Q8N5C8 712 aaPredicted RBP16.32■□□□□ 0.2
SMN2-201ENST00000380741 TTC13Q8NBP0 860 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 OR5AR1Q8NGP9 310 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 CPT1CQ8TCG5 803 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 MRFAP1L1Q96HT8 127 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 TMEM121Q9BTD3 319 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 SLC7A5P2Q9GIP4 190 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 SERTAD3Q9UJW9 196 aa16.32■□□□□ 0.2
SMN2-201ENST00000380741 R3HDM2Q9Y2K5 976 aaKnown RBP16.32■□□□□ 0.2
SMN2-201ENST00000380741 MROH6A6NGR9 719 aa16.31■□□□□ 0.2
SMN2-201ENST00000380741 OR51F1A6NGY5 319 aa16.31■□□□□ 0.2
SMN2-201ENST00000380741 LIN7AO14910 233 aaPredicted RBP16.31■□□□□ 0.2
SMN2-201ENST00000380741 GP1BBP13224 206 aa16.31■□□□□ 0.2
SMN2-201ENST00000380741 MSNP26038 577 aaKnown RBP16.31■□□□□ 0.2
SMN2-201ENST00000380741 NSG1P42857 185 aa16.31■□□□□ 0.2
SMN2-201ENST00000380741 CCDC38Q502W7 563 aa16.31■□□□□ 0.2
SMN2-201ENST00000380741 ZNF385CQ66K41 422 aaPredicted RBP16.31■□□□□ 0.2
SMN2-201ENST00000380741 KIAA1328Q86T90 577 aa16.31■□□□□ 0.2
SMN2-201ENST00000380741 TRIM73Q86UV7 250 aa16.31■□□□□ 0.2
SMN2-201ENST00000380741 ZBTB2Q8N680 514 aa16.31■□□□□ 0.2
SMN2-201ENST00000380741 EFCAB3Q8N7B9 438 aa16.31■□□□□ 0.2
SMN2-201ENST00000380741 UBL4BQ8N7F7 174 aa16.31■□□□□ 0.2
SMN2-201ENST00000380741 C19orf47Q8N9M1 422 aaKnown RBP16.31■□□□□ 0.2
SMN2-201ENST00000380741 FDCSPQ8NFU4 85 aa16.31■□□□□ 0.2
SMN2-201ENST00000380741 SLC35B2Q8TB61 432 aa16.31■□□□□ 0.2
SMN2-201ENST00000380741 ELMO1Q92556 727 aa16.31■□□□□ 0.2
SMN2-201ENST00000380741 ALS2CR12Q96Q35 445 aa16.31■□□□□ 0.2
SMN2-201ENST00000380741 DPH2Q9BQC3 489 aaPredicted RBP16.31■□□□□ 0.2
SMN2-201ENST00000380741 FAM60AQ9NP50 221 aa16.31■□□□□ 0.2
SMN2-201ENST00000380741 ASF1AQ9Y294 204 aa16.31■□□□□ 0.2
SMN2-201ENST00000380741 TCRBV7S2A1N4TA0A589 114 aa16.3■□□□□ 0.2
SMN2-201ENST00000380741 C9J4A7 227 aa16.3■□□□□ 0.2
SMN2-201ENST00000380741 HCRTR1O43613 425 aa16.3■□□□□ 0.2
SMN2-201ENST00000380741 VPS4BO75351 444 aa16.3■□□□□ 0.2
SMN2-201ENST00000380741 SORBS2O94875 1100 aaKnown RBP16.3■□□□□ 0.2
SMN2-201ENST00000380741 FTCDO95954 541 aa16.3■□□□□ 0.2
SMN2-201ENST00000380741 UGT2B7P16662 529 aa16.3■□□□□ 0.2
SMN2-201ENST00000380741 PSMA3P25788 255 aa16.3■□□□□ 0.2
SMN2-201ENST00000380741 ACADLP28330 430 aa16.3■□□□□ 0.2
SMN2-201ENST00000380741 FOXN2P32314 431 aa16.3■□□□□ 0.2
SMN2-201ENST00000380741 SHMT2P34897 504 aa16.3■□□□□ 0.2
SMN2-201ENST00000380741 ATP1A4Q13733 1029 aa16.3■□□□□ 0.2
SMN2-201ENST00000380741 ITIH4Q14624 930 aa16.3■□□□□ 0.2
SMN2-201ENST00000380741 BRD3Q15059 726 aa16.3■□□□□ 0.2
SMN2-201ENST00000380741 DEFB110Q30KQ9 67 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms