RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 A0A1W2PP18 115 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 MYO1GB0I1T2 1018 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 MEN1O00255 615 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 ALPIP09923 528 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 FDXRP22570 491 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 STC1P52823 247 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 TUSC3Q13454 348 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 GTF2H3Q13889 308 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 SIM2Q14190 667 aaPredicted RBP12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 AP5B1Q2VPB7 878 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 ADPRMQ3LIE5 342 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 C6orf136Q5SQH8 315 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 MANEALQ5VSG8 457 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 LETMD1Q6P1Q0 360 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 MSANTD2Q6P1R3 559 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 FKBP9P1Q75LS8 142 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 COLGALT2Q8IYK4 626 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 KRTCAP2Q8N6L1 136 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 CELF2-AS1Q8N7Q2 184 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 DTX3Q8N9I9 347 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 FUBP1Q96AE4 644 aaKnown RBP12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 CNDP2Q96KP4 475 aaKnown RBP12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 TMEM246Q9BRR3 403 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 AARSD1Q9BTE6 412 aaKnown RBP12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 CINPQ9BW66 212 aaPredicted RBP12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 SDR39U1Q9NRG7 319 aaPredicted RBP12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 GPR45Q9Y5Y3 372 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 PLXNA1Q9UIW2 1896 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 FAM172BPA6NC97 362 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 TNFRSF10BO14763 440 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 STX7O15400 261 aaKnown RBP12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 SEC24AO95486 1093 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 PRAMEF12O95522 483 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 RHOQP17081 205 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 ITIH1P19827 911 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 GTF2E2P29084 291 aaKnown RBP12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 RFC2P35250 354 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 POLD2P49005 469 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 ALDH7A1P49419 539 aaKnown RBP12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 HK3P52790 923 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 GNG2P59768 71 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 DPY19L1Q2PZI1 675 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 CD300LGQ6UXG3 332 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 GPRIN3Q6ZVF9 776 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 MON1AQ86VX9 555 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 FAM83FQ8NEG4 500 aaPredicted RBP12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 FRS2Q8WU20 508 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 TRMOQ9BU70 441 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 CRISPLD1Q9H336 500 aa12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 NSUN3Q9H649 340 aaKnown RBP12.24□□□□□ -0.45
PRPF40B-202ENST00000380281 HTR1AP08908 422 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 HRH2P25021 359 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 CASP9P55211 416 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 ERVPABLB-1P60509 514 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 GALK2Q01415 458 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 FAM110CQ1W6H9 321 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 TJAP1Q5JTD0 557 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 ATXN7L2Q5T6C5 722 aaPredicted RBP12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 TAF2Q6P1X5 1199 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 TLR9Q9NR96 1032 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 LATS2Q9NRM7 1088 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 SPEF1Q9Y4P9 236 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 PCDHB9Q9Y5E1 797 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 TANC1Q9C0D5 1861 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 CST1P01037 141 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 IGLV3-25P01717 112 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 NAT2P11245 290 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 KRT6CP48668 564 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 NCS1P62166 190 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 CHRNB3Q05901 458 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 ILF2Q12905 390 aaKnown RBP12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 PRKG2Q13237 762 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 TUBA3CQ13748 450 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 FAM174BQ3ZCQ3 159 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 LRRC73Q5JTD7 316 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 STEAP3Q658P3 488 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 FAM151BQ6UXP7 276 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 PHYKPLQ8IUZ5 450 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 LYSMD2Q8IV50 215 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 PROKR1Q8TCW9 393 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 SLC22A17Q8WUG5 538 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 FAM162AQ96A26 154 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 L3HYPDHQ96EM0 354 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 DUS3LQ96G46 650 aaKnown RBP12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 DEPDC7Q96QD5 511 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 TOR3AQ9H497 397 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 CARS2Q9HA77 564 aaKnown RBP12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 ATP13A1Q9HD20 1204 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 SATB2Q9UPW6 733 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 CAB39Q9Y376 341 aaPredicted RBP12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 ARIH1Q9Y4X5 557 aaPredicted RBP12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 PCDHA9Q9Y5H5 950 aa12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 ZFP37Q9Y6Q3 630 aaPredicted RBP12.23□□□□□ -0.45
PRPF40B-202ENST00000380281 MROH6A6NGR9 719 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 AQP12BA6NM10 295 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 NBNO60934 754 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 C1QCP02747 245 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 JUNBP17275 347 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 CRHBPP24387 322 aa12.22□□□□□ -0.45
PRPF40B-202ENST00000380281 CYP2C18P33260 490 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms