RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 CDKL3Q8IVW4 592 aaPredicted RBP4.53□□□□□ -1.68
C9orf72-203ENST00000380003 ZNF655Q8N720 491 aaPredicted RBP4.53□□□□□ -1.68
C9orf72-203ENST00000380003 SH3KBP1Q96B97 665 aa4.53□□□□□ -1.68
C9orf72-203ENST00000380003 C19orf60Q96EN9 201 aa4.53□□□□□ -1.68
C9orf72-203ENST00000380003 SLC45A3Q96JT2 553 aa4.53□□□□□ -1.68
C9orf72-203ENST00000380003 MACROD1Q9BQ69 325 aa4.53□□□□□ -1.68
C9orf72-203ENST00000380003 DDA1Q9BW61 102 aa4.53□□□□□ -1.68
C9orf72-203ENST00000380003 TRMT1Q9NXH9 659 aaKnown RBP4.53□□□□□ -1.68
C9orf72-203ENST00000380003 ACSL6Q9UKU0 697 aa4.53□□□□□ -1.68
C9orf72-203ENST00000380003 RARRES3Q9UL19 164 aa4.53□□□□□ -1.68
C9orf72-203ENST00000380003 CDYLQ9Y232 598 aa4.53□□□□□ -1.68
C9orf72-203ENST00000380003 ANKRD12Q6UB98 2062 aa4.53□□□□□ -1.68
C9orf72-203ENST00000380003 SVEP1Q4LDE5 3571 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 A1L4Q6 167 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 RGSL1A5PLK6 1076 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 GOLGA6L9A6NEM1 432 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 OR5K4A6NMS3 321 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 TTLL8A6PVC2 850 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 ISM1B1AKI9 464 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 B4E171 279 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 MEN1O00255 615 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 ZNF749O43361 778 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 CREG1O75629 220 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 DLGAP3O95886 979 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 CCNYL3P0C7X3 344 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 ITGALP20701 1170 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 COL8A1P27658 744 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 OTX2P32243 289 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 CCR7P32248 378 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 TSPAN7P41732 249 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 PTGIRP43119 386 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 HADHBP55084 474 aaKnown RBP4.52□□□□□ -1.69
C9orf72-203ENST00000380003 RAB15P59190 212 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 HSD11B2P80365 405 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 EIF2S3LQ2VIR3 472 aaKnown RBP4.52□□□□□ -1.69
C9orf72-203ENST00000380003 ARMC6Q6NXE6 501 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 SUSD1Q6UWL2 747 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 ZNF534Q76KX8 674 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 AMIGO1Q86WK6 493 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 UBL4BQ8N7F7 174 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 ENDOVQ8N8Q3 282 aaKnown RBP4.52□□□□□ -1.69
C9orf72-203ENST00000380003 PPFIBP2Q8ND30 876 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 SLC35B2Q8TB61 432 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 SREK1Q8WXA9 508 aaKnown RBP4.52□□□□□ -1.69
C9orf72-203ENST00000380003 TMEM159Q96B96 161 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 ZNF501Q96CX3 271 aaPredicted RBP4.52□□□□□ -1.69
C9orf72-203ENST00000380003 HES6Q96HZ4 224 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 PWWP2AQ96N64 755 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 ALS2CR12Q96Q35 445 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 VAT1Q99536 393 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 OR52A5Q9H2C5 316 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 TRABDQ9H4I3 376 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 KIR3DX1Q9H7L2 352 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 SYNPO2LQ9H987 977 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 SLC17A6Q9P2U8 582 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 ICKQ9UPZ9 632 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 MYO9AB2RTY4 2548 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 LILRA5A6NI73 299 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 HACD1B0YJ81 288 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 ZNF487B1APH4 448 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.52□□□□□ -1.69
C9orf72-203ENST00000380003 BHMG1C9JSJ3 638 aaPredicted RBP4.52□□□□□ -1.69
C9orf72-203ENST00000380003 LIASO43766 372 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 CEP104O60308 925 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 STK10O94804 968 aaKnown RBP4.52□□□□□ -1.69
C9orf72-203ENST00000380003 VAPBO95292 243 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 EIF2S1P05198 315 aaKnown RBP4.52□□□□□ -1.69
C9orf72-203ENST00000380003 CBSLP0DN79 551 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 RPL22P35268 128 aaKnown RBP4.52□□□□□ -1.69
C9orf72-203ENST00000380003 CBSP35520 551 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 SRSF1Q07955 248 aaKnown RBP eCLIP4.52□□□□□ -1.69
C9orf72-203ENST00000380003 PDAP1Q13442 181 aaKnown RBP4.52□□□□□ -1.69
C9orf72-203ENST00000380003 TRA2AQ13595 282 aaKnown RBP eCLIP4.52□□□□□ -1.69
C9orf72-203ENST00000380003 DNASE1L3Q13609 305 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 PARP6Q2NL67 630 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 ANKRD22Q5VYY1 191 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 CASC4Q6P4E1 433 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 PPP1R21Q6ZMI0 780 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 OOSP2Q86WS3 158 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 PLD3Q8IV08 490 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 CCDC89Q8N998 374 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 LINC01555Q8NAE3 123 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 FDCSPQ8NFU4 85 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 APOBEC4Q8WW27 367 aaKnown RBP4.52□□□□□ -1.69
C9orf72-203ENST00000380003 ANP32EQ9BTT0 268 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 ING2Q9H160 280 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 CLMPQ9H6B4 373 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 GEMIN8Q9NWZ8 242 aaKnown RBP4.52□□□□□ -1.69
C9orf72-203ENST00000380003 NDOR1Q9UHB4 597 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 LCMT1Q9UIC8 334 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 MAN2B2Q9Y2E5 1009 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 TMEM184BQ9Y519 407 aaPredicted RBP4.52□□□□□ -1.69
C9orf72-203ENST00000380003 PCSK5Q92824 1860 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 SCN2AQ99250 2005 aa4.52□□□□□ -1.69
C9orf72-203ENST00000380003 IFRD1O00458 451 aaPredicted RBP4.51□□□□□ -1.69
C9orf72-203ENST00000380003 NIPSNAP2O75323 286 aa4.51□□□□□ -1.69
C9orf72-203ENST00000380003 WISP1O95388 367 aa4.51□□□□□ -1.69
C9orf72-203ENST00000380003 AP2A1O95782 977 aa4.51□□□□□ -1.69
C9orf72-203ENST00000380003 PTMSP20962 102 aa4.51□□□□□ -1.69
C9orf72-203ENST00000380003 MGAT1P26572 445 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms