RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ELOVL2Q9NXB9 296 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 PDP2Q9P2J9 529 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 MUTYHQ9UIF7 546 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 RAB26Q9ULW5 256 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 SLC27A6Q9Y2P4 619 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 MRPS23Q9Y3D9 190 aaKnown RBP10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 AP4S1Q9Y587 144 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 WNT6Q9Y6F9 365 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 ARNTLO00327 626 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 NME4O00746 187 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 LSM1O15116 133 aaKnown RBP10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 LEFTY1O75610 366 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 GUCA1CO95843 209 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 ADH5P11766 374 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 CEBPBP17676 345 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 JAK1P23458 1154 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 AKT1P31749 480 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 CCR7P32248 378 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 ZFP36L2P47974 494 aaKnown RBP10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 RPIAP49247 311 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 DGKGP49619 791 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 AQP4P55087 323 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 AP1S2P56377 157 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 NME5P56597 212 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 ST8SIA6P61647 398 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 RALGDSQ12967 914 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 INPP5AQ14642 412 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 DHCR24Q15392 516 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 GGTA1PQ4G0N0 100 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 ZNF805Q5CZA5 627 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 TCEAL5Q5H9L2 206 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 LDLRAP1Q5SW96 308 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 TMEM215Q68D42 235 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 LCN8Q6JVE9 175 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 TMEM154Q6P9G4 183 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 UBE2R2Q712K3 238 aaPredicted RBP10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 GRASPQ7Z6J2 395 aaPredicted RBP10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 TICAM1Q8IUC6 712 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 SLC15A3Q8IY34 581 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 NRSN1Q8IZ57 195 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 FAM9CQ8IZT9 166 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 SFRP1Q8N474 314 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 SNX31Q8N9S9 440 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 OR2T34Q8NGX1 318 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 OR2T3Q8NH03 318 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 CDK15Q96Q40 435 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 VPS35Q96QK1 796 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 FAM83CQ9BQN1 747 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 KCNH6Q9H252 994 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 CXorf56Q9H5V9 222 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 COPS7BQ9H9Q2 264 aaPredicted RBP10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 PARVBQ9HBI1 364 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 ACTR3BQ9P1U1 418 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 EIF3LQ9Y262 564 aaKnown RBP10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 PCDHA9Q9Y5H5 950 aa10.26□□□□□ -0.77
POLR2J3-201ENST00000379340 USP34Q70CQ2 3546 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 DOCK6Q96HP0 2047 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 KANSL1LA0AUZ9 987 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 DENRO43583 198 aaKnown RBP10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 ULK1O75385 1050 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 PAPLNO95428 1278 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 CLDN9O95484 217 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 KRT6AP02538 564 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 KRT6BP04259 564 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 CYP17A1P05093 508 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 CISD3P0C7P0 127 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 PIM1P11309 404 aaPredicted RBP10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 TIMP2P16035 220 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 SLC6A2P23975 617 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 LTBRP36941 435 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 KRT6CP48668 564 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 HTR6P50406 440 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 UFM1P61960 85 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 NTHL1P78549 312 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 ZNF33BQ06732 778 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 TCF15Q12870 199 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 KCNC3Q14003 757 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 TLR1Q15399 786 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 AP5B1Q2VPB7 878 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 ZNF284Q2VY69 593 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 C18orf21Q32NC0 220 aaPredicted RBP10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 EML3Q32P44 896 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 AASDHQ4L235 1098 aaPredicted RBP10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 ERAP2Q6P179 960 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 CYP20A1Q6UW02 462 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 EP400NLQ6ZTU2 488 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 TRIM46Q7Z4K8 759 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 PTRH1Q86Y79 214 aaKnown RBP10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 TMEM102Q8N9M5 508 aaPredicted RBP10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 GLB1L3Q8NCI6 653 aaPredicted RBP10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 FAM156AQ8NDB6 213 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 PROKR1Q8TCW9 393 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 OSCP1Q8WVF1 389 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 TMEM125Q96AQ2 219 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 ZNF707Q96C28 371 aaPredicted RBP10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 ZBTB18Q99592 522 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 C1orf50Q9BV19 199 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 PCDHAC1Q9H158 963 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 EBF3Q9H4W6 596 aa10.25□□□□□ -0.77
POLR2J3-201ENST00000379340 PCDH12Q9NPG4 1184 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms