RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 KLC4Q9NSK0 619 aa23.97■■□□□ 1.43
ECHDC3-201ENST00000379215 PNPOQ9NVS9 261 aa23.97■■□□□ 1.43
ECHDC3-201ENST00000379215 SPATA6Q9NWH7 488 aaPredicted RBP23.97■■□□□ 1.43
ECHDC3-201ENST00000379215 OPTCQ9UBM4 332 aa23.97■■□□□ 1.43
ECHDC3-201ENST00000379215 EIF2B4Q9UI10 523 aaKnown RBP23.97■■□□□ 1.43
ECHDC3-201ENST00000379215 CA5BQ9Y2D0 317 aa23.97■■□□□ 1.43
ECHDC3-201ENST00000379215 E2F3O00716 465 aa23.96■■□□□ 1.43
ECHDC3-201ENST00000379215 ACADLP28330 430 aa23.96■■□□□ 1.43
ECHDC3-201ENST00000379215 AGTR2P50052 363 aa23.96■■□□□ 1.43
ECHDC3-201ENST00000379215 RPL6Q02878 288 aaKnown RBP23.96■■□□□ 1.43
ECHDC3-201ENST00000379215 SH2D4BQ5SQS7 431 aa23.96■■□□□ 1.43
ECHDC3-201ENST00000379215 LRRC70Q7Z2Q7 622 aa23.96■■□□□ 1.43
ECHDC3-201ENST00000379215 THOC1Q96FV9 657 aaKnown RBP23.96■■□□□ 1.43
ECHDC3-201ENST00000379215 HDAC3O15379 428 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 STK16O75716 305 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 C1orf105O95561 183 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 IDSP22304 550 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 CLCNKAP51800 687 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 AQP5P55064 265 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 ATG14Q6ZNE5 492 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 CHCHD4Q8N4Q1 142 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 RFWD2Q8NHY2 731 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 MOCOSQ96EN8 888 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 HGH1Q9BTY7 390 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 TMEM120AQ9BXJ8 343 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 ACSS2Q9NR19 701 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 GPR27Q9NS67 375 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 TM7SF3Q9NS93 570 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 DNAJC28Q9NX36 388 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 APOBEC2Q9Y235 224 aaKnown RBP23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 ANGPTL3Q9Y5C1 460 aa23.95■■□□□ 1.43
ECHDC3-201ENST00000379215 MEI4A8MW99 385 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 K7EPI3 171 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 MATN2O00339 956 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 TAPBPO15533 448 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 KATNA1O75449 491 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 FUCA1P04066 466 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 CCR10P46092 362 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 CDH13P55290 713 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 PKNOX1P55347 436 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 SRP54P61011 504 aaKnown RBP23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 ZSCAN26Q16670 478 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 DCUN1D3Q8IWE4 304 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 FRMD1Q8N878 549 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 TRPC4APQ8TEL6 797 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 OR1E3Q8WZA6 343 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 ZNF382Q96SR6 550 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 TMEM79Q9BSE2 394 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 MRPL40Q9NQ50 206 aaKnown RBP23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 TRNAU1APQ9NX07 287 aaKnown RBP23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 ZDHHC2Q9UIJ5 367 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 DGKBQ9Y6T7 804 aa23.95■■□□□ 1.42
ECHDC3-201ENST00000379215 PRR19A6NJB7 356 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 MAP3K13O43283 966 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 DCTN3O75935 186 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 FGF4P08620 206 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 HSPA7P48741 367 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 GTF2H2Q13888 395 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 GTF2H2CQ6P1K8 395 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 EFL1Q7Z2Z2 1120 aaKnown RBP23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 IQCHQ86VS3 1027 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 OR13H1Q8NG92 308 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 TFGQ92734 400 aaPredicted RBP23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 SKA1Q96BD8 255 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 KLHDC7BQ96G42 594 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 PDXPQ96GD0 296 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 NECAB3Q96P71 396 aaPredicted RBP23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 ORAI3Q9BRQ5 295 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 ZDHHC5Q9C0B5 715 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 OSGEPL1Q9H4B0 414 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 SLC32A1Q9H598 525 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 KCNK13Q9HB14 408 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 MID1IP1Q9NPA3 183 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 SEMA4BQ9NPR2 832 aaPredicted RBP23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 PRMT8Q9NR22 394 aaPredicted RBP23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 AASDHPPTQ9NRN7 309 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 ASF1AQ9Y294 204 aa23.94■■□□□ 1.42
ECHDC3-201ENST00000379215 LRRC14BA6NHZ5 514 aa23.93■■□□□ 1.42
ECHDC3-201ENST00000379215 TRPC5OSA6NMA1 111 aa23.93■■□□□ 1.42
ECHDC3-201ENST00000379215 MYO1CO00159 1063 aa23.93■■□□□ 1.42
ECHDC3-201ENST00000379215 CCNT2O60583 730 aaKnown RBP23.93■■□□□ 1.42
ECHDC3-201ENST00000379215 OTCP00480 354 aa23.93■■□□□ 1.42
ECHDC3-201ENST00000379215 THEGLP0DJG4 465 aa23.93■■□□□ 1.42
ECHDC3-201ENST00000379215 SF3A3Q12874 501 aaKnown RBP eCLIP23.93■■□□□ 1.42
ECHDC3-201ENST00000379215 RBBP7Q16576 425 aa23.93■■□□□ 1.42
ECHDC3-201ENST00000379215 ZNF771Q7L3S4 317 aaPredicted RBP23.93■■□□□ 1.42
ECHDC3-201ENST00000379215 C11orf74Q86VG3 221 aa23.93■■□□□ 1.42
ECHDC3-201ENST00000379215 CLYBLQ8N0X4 340 aa23.93■■□□□ 1.42
ECHDC3-201ENST00000379215 AGAP11Q8TF27 550 aa23.93■■□□□ 1.42
ECHDC3-201ENST00000379215 RAD51AP1Q96B01 352 aa23.93■■□□□ 1.42
ECHDC3-201ENST00000379215 NSUN5Q96P11 429 aaKnown RBP23.93■■□□□ 1.42
ECHDC3-201ENST00000379215 ESRRBO95718 433 aa23.92■■□□□ 1.42
ECHDC3-201ENST00000379215 TNFP01375 233 aa23.92■■□□□ 1.42
ECHDC3-201ENST00000379215 EPB42P16452 691 aa23.92■■□□□ 1.42
ECHDC3-201ENST00000379215 BDKRB1P46663 353 aa23.92■■□□□ 1.42
ECHDC3-201ENST00000379215 SLC6A12P48065 614 aa23.92■■□□□ 1.42
ECHDC3-201ENST00000379215 RACK1P63244 317 aaKnown RBP23.92■■□□□ 1.42
ECHDC3-201ENST00000379215 CAPRIN2Q6IMN6 1127 aaKnown RBP23.92■■□□□ 1.42
ECHDC3-201ENST00000379215 MBOAT1Q6ZNC8 495 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms