RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 RUVBL1Q9Y265 456 aaKnown RBP14.22□□□□□ -0.13
TCOF1-202ENST00000377797 FPGTO14772 594 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 LDB2O43679 373 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 RPL34P49207 117 aaKnown RBP14.22□□□□□ -0.13
TCOF1-202ENST00000377797 PGFP49763 221 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 CLCN4P51793 760 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 HERC3Q15034 1050 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 ZNF776Q68DI1 518 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-202ENST00000377797 C16orf87Q6PH81 154 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 AGRPO00253 132 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 OR1F1O43749 312 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 MT-ND1P03886 318 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 HOXB2P14652 356 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 FDXRP22570 491 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 ACTR3P61158 418 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 MTX3Q5HYI7 312 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 LRRTM4Q86VH4 590 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 GLB1L3Q8NCI6 653 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-202ENST00000377797 SCRN2Q96FV2 425 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 CEP44Q9C0F1 390 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 MTG2Q9H4K7 406 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 IL17CQ9P0M4 197 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 CFAP20Q9Y6A4 193 aaKnown RBP14.22□□□□□ -0.13
TCOF1-202ENST00000377797 HIDE1A8MVS5 230 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 M0R3G1 203 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 BPIP17213 487 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 ITGAXP20702 1163 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 RXRGP48443 463 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 CLCNKAP51800 687 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 NEK2P51955 445 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 LAPTM5Q13571 262 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 ELAVL3Q14576 367 aaKnown RBP14.22□□□□□ -0.13
TCOF1-202ENST00000377797 HTR3DQ70Z44 454 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 TBC1D21Q8IYX1 336 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 HMGB4Q8WW32 186 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 USP7Q93009 1102 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 CIB1Q99828 191 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 FAM234BA2RU67 622 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 LRRC14BA6NHZ5 514 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 DHRS4L1P0CG22 281 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 NR2F1P10589 423 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 SLC6A2P23975 617 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 GGT5P36269 586 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 CDKN1CP49918 316 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-202ENST00000377797 EIF4HQ15056 248 aaKnown RBP14.21□□□□□ -0.13
TCOF1-202ENST00000377797 ATP13A5Q4VNC0 1218 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 FRG2Q64ET8 278 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 BHLHB9Q6PI77 547 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 ANKRD49Q8WVL7 239 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 FRG2BQ96QU4 278 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 SLC39A3Q9BRY0 314 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 PCDHAC1Q9H158 963 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 PRKAB1Q9Y478 270 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 ELOVL7A1L3X0 281 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 ACRV1P26436 265 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 MPP7Q5T2T1 576 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 CARS2Q9HA77 564 aaKnown RBP14.21□□□□□ -0.13
TCOF1-202ENST00000377797 ZBTB26Q9HCK0 441 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 POLMQ9NP87 494 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-202ENST00000377797 ZDHHC7Q9NXF8 308 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 ANGPT4Q9Y264 503 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 TMEM98Q9Y2Y6 226 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 CEP290O15078 2479 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 PTGES3LE9PB15 166 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 IL6P05231 212 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 ACTR1BP42025 376 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 SLC16A1P53985 500 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 PNLIPRP1P54315 467 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 ERVFC1P60507 584 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 ACTR1AP61163 376 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 PDK3Q15120 406 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 OTUD1Q5VV17 481 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-202ENST00000377797 AGTRAPQ6RW13 159 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 ERN2Q76MJ5 926 aaKnown RBP14.21□□□□□ -0.13
TCOF1-202ENST00000377797 LRRC70Q7Z2Q7 622 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 PLD3Q8IV08 490 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 OR10A6Q8NH74 314 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 TFGQ92734 400 aaPredicted RBP14.21□□□□□ -0.13
TCOF1-202ENST00000377797 GLYATL1Q969I3 302 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 DPEP2Q9H4A9 486 aa14.21□□□□□ -0.13
TCOF1-202ENST00000377797 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.21□□□□□ -0.14
TCOF1-202ENST00000377797 LOC285095A0A1B0GVY8 99 aa14.21□□□□□ -0.14
TCOF1-202ENST00000377797 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.21□□□□□ -0.14
TCOF1-202ENST00000377797 KAT7O95251 611 aa14.21□□□□□ -0.14
TCOF1-202ENST00000377797 PFKLP17858 780 aa14.21□□□□□ -0.14
TCOF1-202ENST00000377797 EN2P19622 333 aaPredicted RBP14.21□□□□□ -0.14
TCOF1-202ENST00000377797 RPL10P27635 214 aaKnown RBP14.21□□□□□ -0.14
TCOF1-202ENST00000377797 HOXD9P28356 352 aaPredicted RBP14.21□□□□□ -0.14
TCOF1-202ENST00000377797 RANBP1P43487 201 aa14.21□□□□□ -0.14
TCOF1-202ENST00000377797 BDKRB1P46663 353 aa14.21□□□□□ -0.14
TCOF1-202ENST00000377797 MAPK12P53778 367 aa14.21□□□□□ -0.14
TCOF1-202ENST00000377797 SLC7A9P82251 487 aa14.21□□□□□ -0.14
TCOF1-202ENST00000377797 TAF8Q7Z7C8 310 aa14.21□□□□□ -0.14
TCOF1-202ENST00000377797 ISCA2Q86U28 154 aa14.21□□□□□ -0.14
TCOF1-202ENST00000377797 SMIM14Q96QK8 99 aa14.21□□□□□ -0.14
TCOF1-202ENST00000377797 HCFC2Q9Y5Z7 792 aa14.21□□□□□ -0.14
TCOF1-202ENST00000377797 AP4B1Q9Y6B7 739 aa14.21□□□□□ -0.14
TCOF1-202ENST00000377797 H3BN98 237 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 GJB3O75712 270 aa14.2□□□□□ -0.14
TCOF1-202ENST00000377797 UNC50Q53HI1 259 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms