RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 PYCR2Q96C36 320 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 ZBED6CLQ96FA7 236 aaPredicted RBP13.39□□□□□ -0.27
GPC6-201ENST00000377047 NMUR2Q9GZQ4 415 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 COQ4Q9Y3A0 265 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 UBE2QL1A1L167 161 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 UPK3BL1B0FP48 263 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 UPK3BL2E5RIL1 263 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 HOXB6P17509 224 aaKnown RBP13.39□□□□□ -0.27
GPC6-201ENST00000377047 LBX1P52954 281 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 SAMD14Q8IZD0 417 aaPredicted RBP13.39□□□□□ -0.27
GPC6-201ENST00000377047 NIPA2Q8N8Q9 360 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 TTLQ8NG68 377 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 AP3S1Q92572 193 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 PNPLA3Q9NST1 481 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 PHF11Q9UIL8 331 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 NDUFS4O43181 175 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 RBMXL2O75526 392 aaKnown RBP13.39□□□□□ -0.27
GPC6-201ENST00000377047 RPL10P27635 214 aaKnown RBP13.39□□□□□ -0.27
GPC6-201ENST00000377047 NFKB2Q00653 900 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 ITGADQ13349 1161 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 CDCA2Q69YH5 1023 aaPredicted RBP13.39□□□□□ -0.27
GPC6-201ENST00000377047 NUP54Q7Z3B4 507 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 RASSF5Q8WWW0 418 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 RAD9AQ99638 391 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 SMOC2Q9H3U7 446 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 BTBD3Q9Y2F9 522 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 PGRMC2O15173 223 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 PCDH7O60245 1069 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 TCEA3O75764 348 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 CLDN7O95471 211 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 STATHP02808 62 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 GPR17Q13304 367 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 PRAMEF14Q5SWL7 426 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 PRAMEF13Q5VWM6 474 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 GKN2Q86XP6 184 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 ZNF461Q8TAF7 563 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 DGAT2Q96PD7 388 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 SPATA9Q9BWV2 254 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 CCNB1IP1Q9NPC3 277 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 RAPGEFL1Q9UHV5 662 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 CLEC4AQ9UMR7 237 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 CNTN6Q9UQ52 1028 aa13.39□□□□□ -0.27
GPC6-201ENST00000377047 SSNA1O43805 119 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 ATP1B2P14415 290 aaPredicted RBP13.38□□□□□ -0.27
GPC6-201ENST00000377047 CAPGP40121 348 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 SLC26A3P40879 764 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 IRF9Q00978 393 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 HKDC1Q2TB90 917 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 LIN54Q6MZP7 749 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 CXorf57Q6NSI4 855 aaKnown RBP13.38□□□□□ -0.27
GPC6-201ENST00000377047 ZCCHC12Q6PEW1 402 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 AMIGO3Q86WK7 504 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 SNX33Q8WV41 574 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 PIGKQ92643 395 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 ART5Q96L15 291 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 CDK15Q96Q40 435 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 ADAP2Q9NPF8 381 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 TLL2Q9Y6L7 1015 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 CASKO14936 926 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 PGM3O95394 542 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 CFHP08603 1231 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 TTKP33981 857 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 GRK6P43250 576 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 RPS14P62263 151 aaKnown RBP13.38□□□□□ -0.27
GPC6-201ENST00000377047 SGCBQ16585 318 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 GJD3Q8N144 294 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 C7orf26Q96N11 449 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 NDC1Q9BTX1 674 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 NEMP2A6NFY4 417 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 PLGP00747 810 aaPredicted RBP13.38□□□□□ -0.27
GPC6-201ENST00000377047 TGFB1P01137 390 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 BDKRB1P46663 353 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 SIM2Q14190 667 aaPredicted RBP13.38□□□□□ -0.27
GPC6-201ENST00000377047 FRRS1Q6ZNA5 592 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 ALG2Q9H553 416 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 PLEKHA1Q9HB21 404 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 TMEM98Q9Y2Y6 226 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 AP4B1Q9Y6B7 739 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 IL1R2P27930 398 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 CCNHP51946 323 aaPredicted RBP13.38□□□□□ -0.27
GPC6-201ENST00000377047 BADQ92934 168 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 C1GALT1C1Q96EU7 318 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 CPSF4LA6NMK7 179 aaKnown RBP13.38□□□□□ -0.27
GPC6-201ENST00000377047 NPHS1O60500 1241 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 PLIN3O60664 434 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 ALOX5P09917 674 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 CSF2RAP15509 400 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 PTGIRP43119 386 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 DNASE1L1P49184 302 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 GPR107Q5VW38 600 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 MLIPQ5VWP3 458 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 TRMT10BQ6PF06 316 aaKnown RBP13.38□□□□□ -0.27
GPC6-201ENST00000377047 TMEM110Q86TL2 294 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 ZNF433Q8N7K0 673 aaPredicted RBP13.38□□□□□ -0.27
GPC6-201ENST00000377047 OR10A6Q8NH74 314 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 PLGRKTQ9HBL7 147 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 GDAP2Q9NXN4 497 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 SIGLEC1Q9BZZ2 1709 aa13.38□□□□□ -0.27
GPC6-201ENST00000377047 TLX3O43711 291 aaPredicted RBP13.37□□□□□ -0.27
GPC6-201ENST00000377047 LYNP07948 512 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms