RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 CRHBPP24387 322 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 MAP4P27816 1152 aaKnown RBP24.79■■□□□ 1.56
C9orf40-201ENST00000376854 BNIP3Q12983 259 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 LAPTM5Q13571 262 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 IMPG1Q17R60 797 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 ANKDD1AQ495B1 522 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 XAF1Q6GPH4 301 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 XKR5Q6UX68 686 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 R3HCC1LQ7Z5L2 792 aaKnown RBP24.79■■□□□ 1.56
C9orf40-201ENST00000376854 OR6K2Q8NGY2 324 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 RAET1EQ8TD07 263 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 CEP295NLQ96MC4 621 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 OSBPL10Q9BXB5 764 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 KLF16Q9BXK1 252 aaPredicted RBP24.79■■□□□ 1.56
C9orf40-201ENST00000376854 TM6SF2Q9BZW4 377 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 LRTM1Q9HBL6 345 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 LMCD1Q9NZU5 365 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 CXCR6O00574 342 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 NOBOXO60393 691 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 IL7RP16871 459 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 TPD52P55327 224 aaPredicted RBP24.79■■□□□ 1.56
C9orf40-201ENST00000376854 NFATC3Q12968 1075 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 NFATC2Q13469 925 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 ANKRD26P1Q6NSI1 321 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 DUS1LQ6P1R4 473 aaKnown RBP24.79■■□□□ 1.56
C9orf40-201ENST00000376854 SNX20Q7Z614 316 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 GALNT13Q8IUC8 556 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 HS3ST5Q8IZT8 346 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 ZBTB2Q8N680 514 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 RHBDF1Q96CC6 855 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 NRBF2Q96F24 287 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 MBOAT4Q96T53 435 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 SH3GL1Q99961 368 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 ZFYVE1Q9HBF4 777 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 LTB4R2Q9NPC1 389 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 VPS51Q9UID3 782 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 INVSQ9Y283 1065 aa24.79■■□□□ 1.56
C9orf40-201ENST00000376854 ZNF829Q3KNS6 432 aaPredicted RBP24.78■■□□□ 1.56
C9orf40-201ENST00000376854 SLC8B1Q6J4K2 584 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 Q6ZNX1 250 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 TRIM46Q7Z4K8 759 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 RGL4Q8IZJ4 473 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 ZNF555Q8NEP9 628 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 SNX19Q92543 992 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 BORCS5Q969J3 196 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 TSEN34Q9BSV6 310 aaKnown RBP24.78■■□□□ 1.56
C9orf40-201ENST00000376854 CLMPQ9H6B4 373 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 TBC1D23Q9NUY8 699 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 PCDHGA8Q9Y5G5 932 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 K7ERQ8 282 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 PRKD3O94806 890 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 SCELO95171 688 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 ZNF182P17025 639 aaPredicted RBP24.78■■□□□ 1.56
C9orf40-201ENST00000376854 ITGALP20701 1170 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 GGT5P36269 586 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 PPP2R2BQ00005 443 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 EPS8Q12929 822 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 RUNDC3AQ59EK9 446 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 SVOPLQ8N434 492 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 HDAC2Q92769 488 aaKnown RBP24.78■■□□□ 1.56
C9orf40-201ENST00000376854 ACDQ96AP0 544 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 OR52E6Q96RD3 313 aa24.78■■□□□ 1.56
C9orf40-201ENST00000376854 C1orf232A0A0U1RR37 186 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 K7EPI3 171 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 WDR47O94967 919 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 INHAP05111 366 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 UGT1A1P22309 533 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 UGT1A4P22310 534 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 UGT1A3P35503 534 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 UGT1A5P35504 534 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 TUBA3CQ13748 450 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 SKIV2LQ15477 1246 aaKnown RBP24.77■■□□□ 1.56
C9orf40-201ENST00000376854 GTDC1Q4AE62 458 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 SUSD1Q6UWL2 747 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 NPAS4Q8IUM7 802 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 ZC3H7AQ8IWR0 971 aaKnown RBP24.77■■□□□ 1.56
C9orf40-201ENST00000376854 PAF1Q8N7H5 531 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 SMYD1Q8NB12 490 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 BPIFB6Q8NFQ5 453 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 SGCDQ92629 289 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 TANKQ92844 425 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 ULK4Q96C45 1275 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 AMBRA1Q9C0C7 1298 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 LHPPQ9H008 270 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 IL26Q9NPH9 171 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 TRPS1Q9UHF7 1281 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 LOC730098B7Z3J9 87 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 MANBAO00462 879 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 SEC24AO95486 1093 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 EBLN1P0CF75 366 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 BMP1P13497 986 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 ACRV1P26436 265 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 PIGAP37287 484 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 AP1S1P61966 158 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 SPESP1Q6UW49 350 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 GCNT7Q6ZNI0 430 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 RNF165Q6ZSG1 346 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 FKBP9P1Q75LS8 142 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 PHACTR4Q8IZ21 702 aa24.77■■□□□ 1.56
C9orf40-201ENST00000376854 PJA1Q8NG27 643 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms