RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ABRQ12979 859 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 UGT8Q16880 541 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 PLEKHS1Q5SXH7 462 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 IZUMO3Q5VZ72 239 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 LCN10Q6JVE6 187 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 TCTN3Q6NUS6 607 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 PACS1Q6VY07 963 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 SYVN1Q86TM6 617 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 PRUNE1Q86TP1 453 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 SLC13A5Q86YT5 568 aaPredicted RBP13.8□□□□□ -0.2
NELFE-201ENST00000375425 OR5AR1Q8NGP9 310 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 OR1L3Q8NH93 324 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 SEC14L1Q92503 715 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 CPT1BQ92523 772 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 CLIP3Q96DZ5 547 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 LRFN5Q96NI6 719 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 TRAPPC9Q96Q05 1148 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 PITPNM3Q9BZ71 974 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 CHST8Q9H2A9 424 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 SYTL2Q9HCH5 934 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 ACTR10Q9NZ32 417 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 SLC2A6Q9UGQ3 507 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 SERTAD3Q9UJW9 196 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 TLK1Q9UKI8 766 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 ASF1AQ9Y294 204 aa13.8□□□□□ -0.2
NELFE-201ENST00000375425 HEATR9A2RTY3 570 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 E7EVH7 732 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 QSOX1O00391 747 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 KRT86O43790 486 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 RFPL1O75677 317 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 OR56A5P0C7T3 313 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 MSL3P1P0C860 447 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 PVRP15151 417 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 ADRA1DP25100 572 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 ACADLP28330 430 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 PMS2P54278 862 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 GSDMDP57764 484 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 SEMA5AQ13591 1074 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 SNX1Q13596 522 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 LAMB3Q13751 1172 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 IGFBP7Q16270 282 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 COLEC12Q5KU26 742 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 TSTD2Q5T7W7 516 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 LYPLAL1Q5VWZ2 237 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 PPP1R21Q6ZMI0 780 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 UNC5AQ6ZN44 842 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 APLFQ8IW19 511 aaPredicted RBP13.79□□□□□ -0.2
NELFE-201ENST00000375425 DSELQ8IZU8 1212 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 OR4L1Q8NH43 312 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 UBE2Q2Q8WVN8 375 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 THAP4Q8WY91 577 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.79□□□□□ -0.2
NELFE-201ENST00000375425 ZNF778Q96MU6 729 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 TTC1Q99614 292 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 TSGA10Q9BZW7 698 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 RAB6BQ9NRW1 208 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 ICKQ9UPZ9 632 aa13.79□□□□□ -0.2
NELFE-201ENST00000375425 SLC5A10A0PJK1 596 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 BHMG1C9JSJ3 638 aaPredicted RBP13.78□□□□□ -0.2
NELFE-201ENST00000375425 DNAJB5O75953 348 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 GOT2P00505 430 aaKnown RBP13.78□□□□□ -0.2
NELFE-201ENST00000375425 CYP2A7P20853 494 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 RORAP35398 523 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 PLOD1Q02809 727 aaPredicted RBP13.78□□□□□ -0.2
NELFE-201ENST00000375425 KLRB1Q12918 225 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 IL10RAQ13651 578 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 ZNF789Q5FWF6 425 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 SPESP1Q6UW49 350 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 ASB18Q6ZVZ8 466 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 TBC1D21Q8IYX1 336 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 TEX19Q8NA77 164 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 GLIS1Q8NBF1 620 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 OR6P1Q8NGX9 317 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 RANBP9Q96S59 729 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 TRIM55Q9BYV6 548 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 SLC7A5P2Q9GIP4 190 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 ACTR5Q9H9F9 607 aaPredicted RBP13.78□□□□□ -0.2
NELFE-201ENST00000375425 CASS4Q9NQ75 786 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 PCMTD2Q9NV79 361 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 POLG2Q9UHN1 485 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 RIMKLBQ9ULI2 386 aa13.78□□□□□ -0.2
NELFE-201ENST00000375425 GOLGA6L6A8MZA4 724 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 ARHGAP6O43182 974 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 APRTP07741 180 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 RAB40ALP0C0E4 278 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 ZSCAN5DPP0CG00 497 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 TPBGLP0DKB5 382 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 SHMT2P34897 504 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 RPS6KA1Q15418 735 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 SYTL3Q4VX76 610 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 MEI1Q5TIA1 1274 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 AFTPHQ6ULP2 937 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 CDHR3Q6ZTQ4 885 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 ZNF534Q76KX8 674 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 NLRP9Q7RTR0 991 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 HOOK3Q86VS8 718 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 ENDOVQ8N8Q3 282 aaKnown RBP13.77□□□□□ -0.21
NELFE-201ENST00000375425 OR5K2Q8NHB8 316 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 OR2A14Q96R47 310 aa13.77□□□□□ -0.21
NELFE-201ENST00000375425 NLNQ9BYT8 704 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms