RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 ETV6P41212 452 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 CDKN2DP55273 166 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 TAGLNQ01995 201 aaKnown RBP20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 TMEM132DQ14C87 1099 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 CAPN13Q6MZZ7 669 aaPredicted RBP20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 SYCE2Q6PIF2 218 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 PDZD4Q76G19 769 aaPredicted RBP20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 ZMIZ2Q8NF64 920 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 NECTIN4Q96NY8 510 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 OR51E2Q9H255 320 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 ASB7Q9H672 318 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 CCNB1IP1Q9NPC3 277 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 COQ3Q9NZJ6 369 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 CCDC59Q9P031 241 aaKnown RBP20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 CSADQ9Y600 493 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 LTBP3Q9NS15 1303 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 MYLKQ15746 1914 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 OR6C70A6NIJ9 312 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 LEUTXA8MZ59 168 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 DET1Q7L5Y6 550 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 ZNF598Q86UK7 904 aaKnown RBP20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 CACTIN-AS1Q8N1I8 211 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 PROKR1Q8TCW9 393 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 TMCO6Q96DC7 493 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 CCDC32Q9BV29 185 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 PDGFCQ9NRA1 345 aa20.21■□□□□ 0.83
TMEFF1-201ENST00000374879 FAM234BA2RU67 622 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 M0QYT0 321 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 PRR35P0CG20 571 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 TRAPPC2P0DI81 140 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 TRAPPC2BP0DI82 140 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 DNAJB2P25686 324 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 CHRNA4P43681 627 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 NFKB2Q00653 900 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 AMHR2Q16671 573 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 DPY19L3Q6ZPD9 716 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 LDB1Q86U70 411 aaPredicted RBP20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 KCNS3Q9BQ31 491 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 FICDQ9BVA6 458 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 NFKBIZQ9BYH8 718 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 ATXN3LQ9H3M9 355 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 TXNRD2Q9NNW7 524 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 TREX1Q9NSU2 369 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 VNN3Q9NY84 501 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 TEKT2Q9UIF3 430 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 MCM3APO60318 1980 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 NPPAP01160 153 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 GLULP15104 373 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 HOXD10P28358 340 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 EPHA2P29317 976 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 CA5AP35218 305 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 HNF4AP41235 474 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 GRIK2Q13002 908 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 EFR3AQ14156 821 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 MAD2L1BPQ15013 274 aaPredicted RBP20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 SLC14A2Q15849 920 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 ARMC4Q5T2S8 1044 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 OR2T12Q8NG77 320 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 ZFAND1Q8TCF1 268 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 AIFM2Q9BRQ8 373 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 BRINP2Q9C0B6 783 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 SEMA4BQ9NPR2 832 aaPredicted RBP20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 KLHL20Q9Y2M5 609 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 PCDHGB2Q9Y5G2 931 aa20.2■□□□□ 0.82
TMEFF1-201ENST00000374879 AKR7A2O43488 359 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 VPS4BO75351 444 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 CRCPO75575 148 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 UGT2B17O75795 530 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 CYP2C8P10632 490 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 INSRRP14616 1297 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 ZNF37AP17032 561 aaPredicted RBP20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 ARF4P18085 180 aaPredicted RBP20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 UGT2B15P54855 530 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 TIGD6Q17RP2 521 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 AAK1Q2M2I8 961 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 TOR2AQ5JU69 321 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 LRRC8DQ7L1W4 858 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 CHPFQ8IZ52 775 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 OR10Q1Q8NGQ4 319 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 DEDD2Q8WXF8 326 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 PMEPA1Q969W9 287 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 TSPAN17Q96FV3 270 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 SIGLEC11Q96RL6 698 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 UCK2Q9BZX2 261 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 PIGVQ9NUD9 493 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 AKT3Q9Y243 479 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 COL1A2P08123 1366 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 A0A096LPI6 279 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 AGRPO00253 132 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 C21orf33P30042 268 aaPredicted RBP20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 IL12RB1P42701 662 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 CLCN5P51795 746 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 TPI1P60174 286 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 CTAG1AP78358 180 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 FAPQ12884 760 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 KCTD2Q14681 263 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 ATP6AP1LQ52LC2 224 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 HIPK1Q86Z02 1210 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 DPP10Q8N608 796 aa20.19■□□□□ 0.82
TMEFF1-201ENST00000374879 KBTBD8Q8NFY9 601 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms