RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 PTX3P26022 381 aaPredicted RBP17.11■□□□□ 0.33
PTPRU-202ENST00000373779 RPS24P62847 133 aaKnown RBP17.11■□□□□ 0.33
PTPRU-202ENST00000373779 C2orf80Q0P641 193 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 PPP1R8Q12972 351 aaKnown RBP17.11■□□□□ 0.33
PTPRU-202ENST00000373779 ZSWIM7Q19AV6 140 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 MPPE1Q53F39 396 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 PDE12Q6L8Q7 609 aaKnown RBP17.11■□□□□ 0.33
PTPRU-202ENST00000373779 CORO1BQ9BR76 489 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 ASAH2Q9NR71 780 aa17.11■□□□□ 0.33
PTPRU-202ENST00000373779 DNAJA1P31689 397 aaKnown RBP17.1■□□□□ 0.33
PTPRU-202ENST00000373779 BUD31P41223 144 aaPredicted RBP17.1■□□□□ 0.33
PTPRU-202ENST00000373779 MEP1AQ16819 746 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 MS4A13Q5J8X5 152 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 CYP2U1Q7Z449 544 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 TMEM199Q8N511 208 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 OR52L1Q8NGH7 329 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 PPP1R16AQ96I34 528 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 MAGEE1Q9HCI5 957 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 EMCNQ9ULC0 261 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 SCML2Q9UQR0 700 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 TBX1O43435 398 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 ATG13O75143 517 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 ENO2P09104 434 aaPredicted RBP17.1■□□□□ 0.33
PTPRU-202ENST00000373779 CD1DP15813 335 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 EFNA1P20827 205 aaPredicted RBP17.1■□□□□ 0.33
PTPRU-202ENST00000373779 GLDCP23378 1020 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 HNF4AP41235 474 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 MAPK9P45984 424 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 GRB7Q14451 532 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 ZNF792Q3KQV3 632 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 UNC50Q53HI1 259 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 ADAMTS10Q9H324 1103 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 RUVBL1Q9Y265 456 aaKnown RBP17.1■□□□□ 0.33
PTPRU-202ENST00000373779 ADAMTS7Q9UKP4 1686 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 CYP7B1O75881 506 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 ELFN1P0C7U0 828 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 C7P10643 843 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 GABRR2P28476 465 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 EMX2Q04743 252 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 PLEKHG6Q3KR16 790 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 IFI44LQ53G44 452 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 ERLEC1Q96DZ1 483 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 MTIF3Q9H2K0 278 aaKnown RBP17.1■□□□□ 0.33
PTPRU-202ENST00000373779 ZNF232Q9UNY5 417 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 IL4RP24394 825 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 STX4Q12846 297 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 PTPRCAPQ14761 206 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 NANOGP8Q6NSW7 305 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 NPWQ8N729 165 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 BIRC8Q96P09 236 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 C16orf70Q9BSU1 422 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 NANOGQ9H9S0 305 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 IRGMA1A4Y4 181 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 H0YAE9 185 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 GRID2O43424 1007 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 CCNB2O95067 398 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 SNAP29O95721 258 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 KCNA10Q16322 511 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 GTPBP3Q969Y2 492 aaKnown RBP17.1■□□□□ 0.33
PTPRU-202ENST00000373779 C1GALT1C1Q96EU7 318 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 UBAP1Q9NZ09 502 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 ASF1AQ9Y294 204 aa17.1■□□□□ 0.33
PTPRU-202ENST00000373779 GRM6O15303 877 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 CNTN5O94779 1100 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 CDK14O94921 469 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 PTPN5P54829 565 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 MS4A2Q01362 244 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 IFNLR1Q8IU57 520 aaPredicted RBP17.09■□□□□ 0.33
PTPRU-202ENST00000373779 CXorf40AQ8TE69 158 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 PIK3R3Q92569 461 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 RPRD1BQ9NQG5 326 aaKnown RBP17.09■□□□□ 0.33
PTPRU-202ENST00000373779 H0Y858 1186 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 SOCS2O14508 198 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 ELK4P28324 431 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 SRP54P61011 504 aaKnown RBP17.09■□□□□ 0.33
PTPRU-202ENST00000373779 SOX4Q06945 474 aaPredicted RBP17.09■□□□□ 0.33
PTPRU-202ENST00000373779 TIGD6Q17RP2 521 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 ALFQ53S48 1182 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 OR2T5Q6IEZ7 315 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 MED27Q6P2C8 311 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 C14orf80Q86SX3 495 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 SLC15A3Q8IY34 581 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 GPR65Q8IYL9 337 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 OR2T29Q8NH02 315 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 ZNF671Q8TAW3 534 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 PRICKLE1Q96MT3 831 aaPredicted RBP17.09■□□□□ 0.33
PTPRU-202ENST00000373779 CD84Q9UIB8 345 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 GTF2A1LQ9UNN4 478 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 COL22A1Q8NFW1 1626 aaPredicted RBP17.09■□□□□ 0.33
PTPRU-202ENST00000373779 AGRPO00253 132 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 EOMESO95936 686 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 F2P00734 622 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 MYBPC3Q14896 1274 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 GPRIN1Q7Z2K8 1008 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 C16orf62Q7Z3J2 963 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 PGBD3Q8N328 593 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 KBTBD7Q8WVZ9 684 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 ARNTL2Q8WYA1 636 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 MUS81Q96NY9 551 aa17.09■□□□□ 0.33
PTPRU-202ENST00000373779 NSUN5Q96P11 429 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms