RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 GPC2Q8N158 579 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 C10orf111Q8N326 155 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 VNN3Q9NY84 501 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 SNPHO15079 494 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 FKBP9O95302 570 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 S100BP04271 92 aaPredicted RBP17.43■□□□□ 0.38
VPS26A-202ENST00000373382 RGRP47804 291 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 ILF2Q12905 390 aaKnown RBP17.43■□□□□ 0.38
VPS26A-202ENST00000373382 EPS8Q12929 822 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 CLCA4Q14CN2 919 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 SPATS1Q496A3 300 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 FAM171BQ6P995 826 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 FKBP9P1Q75LS8 142 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 CCDC103Q8IW40 242 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 ATG16L2Q8NAA4 619 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 ZNF548Q8NEK5 533 aaPredicted RBP17.43■□□□□ 0.38
VPS26A-202ENST00000373382 OR5K1Q8NHB7 308 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 LGALS12Q96DT0 336 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 NDEL1Q9GZM8 345 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 SCHIP1Q9P0W5 487 aaPredicted RBP17.43■□□□□ 0.38
VPS26A-202ENST00000373382 EIF3LQ9Y262 564 aaKnown RBP17.43■□□□□ 0.38
VPS26A-202ENST00000373382 TMED5Q9Y3A6 229 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 SLC22A1O15245 554 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 ALOX5P09917 674 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 ALOX12P18054 663 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 MSH3P20585 1137 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 OGNP20774 298 aaKnown RBP17.43■□□□□ 0.38
VPS26A-202ENST00000373382 TOP3AQ13472 1001 aaPredicted RBP17.43■□□□□ 0.38
VPS26A-202ENST00000373382 PCBP1Q15365 356 aaKnown RBP eCLIP17.43■□□□□ 0.38
VPS26A-202ENST00000373382 PHKG1Q16816 387 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 ZNF691Q5VV52 312 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 KLHDC9Q8NEP7 349 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 MDGA1Q8NFP4 955 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 MAGEE1Q9HCI5 957 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 AFF4Q9UHB7 1163 aaKnown RBP17.43■□□□□ 0.38
VPS26A-202ENST00000373382 KCNH4Q9UQ05 1017 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 PCDHGA10Q9Y5H3 936 aa17.43■□□□□ 0.38
VPS26A-202ENST00000373382 PDE4DIPQ5VU43 2346 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 C2orf81A6NN90 581 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 EFNA1P20827 205 aaPredicted RBP17.42■□□□□ 0.38
VPS26A-202ENST00000373382 PBX3P40426 434 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 CYP4F2P78329 520 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 GRIK2Q13002 908 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 GTF2H2Q13888 395 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 GTF2H2CQ6P1K8 395 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 CYP4Z1Q86W10 505 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 ZDHHC21Q8IVQ6 265 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 MFSD4AQ8N468 514 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 TTC9BQ8N6N2 239 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 OR6Q1Q8NGQ2 317 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 GTF2H4Q92759 462 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 ULK4Q96C45 1275 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 TSSK3Q96PN8 268 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 ZBTB20Q9HC78 741 aaPredicted RBP17.42■□□□□ 0.38
VPS26A-202ENST00000373382 SLC25A37Q9NYZ2 338 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 CAB39Q9Y376 341 aaPredicted RBP17.42■□□□□ 0.38
VPS26A-202ENST00000373382 TPRKBQ9Y3C4 175 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 UPK3BL1B0FP48 263 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 UPK3BL2E5RIL1 263 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 STX7O15400 261 aaKnown RBP17.42■□□□□ 0.38
VPS26A-202ENST00000373382 RECQL5O94762 991 aaPredicted RBP17.42■□□□□ 0.38
VPS26A-202ENST00000373382 PGRP06401 933 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 TRPC1P48995 793 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 SUOXP51687 545 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 CBX2Q14781 532 aaPredicted RBP17.42■□□□□ 0.38
VPS26A-202ENST00000373382 HIST2H2ACQ16777 129 aaPredicted RBP17.42■□□□□ 0.38
VPS26A-202ENST00000373382 LAIR1Q6GTX8 287 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 DPP10Q8N608 796 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 ATAD1Q8NBU5 361 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 PRG3Q9Y2Y8 225 aaPredicted RBP17.42■□□□□ 0.38
VPS26A-202ENST00000373382 LINC00854A0A1B0GVQ3 168 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 EFCAB9A8MZ26 197 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 GABARAPO95166 117 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 NDST3O95803 873 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 HPRP00739 348 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 HOXB8P17481 243 aaPredicted RBP17.42■□□□□ 0.38
VPS26A-202ENST00000373382 MASP1P48740 699 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 AGAP7PQ5VUJ5 663 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 CEP68Q76N32 757 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 SVOPLQ8N434 492 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 DSN1Q9H410 356 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 PKP3Q9Y446 797 aa17.42■□□□□ 0.38
VPS26A-202ENST00000373382 PDCD11Q14690 1871 aaKnown RBP17.41■□□□□ 0.38
VPS26A-202ENST00000373382 NYNRINQ9P2P1 1898 aaKnown RBP17.41■□□□□ 0.38
VPS26A-202ENST00000373382 STX16O14662 325 aa17.41■□□□□ 0.38
VPS26A-202ENST00000373382 ADAM17P78536 824 aa17.41■□□□□ 0.38
VPS26A-202ENST00000373382 CPSF6Q16630 551 aaKnown RBP eCLIP17.41■□□□□ 0.38
VPS26A-202ENST00000373382 ATAD3BQ5T9A4 648 aa17.41■□□□□ 0.38
VPS26A-202ENST00000373382 ZNF772Q68DY9 489 aaPredicted RBP17.41■□□□□ 0.38
VPS26A-202ENST00000373382 AFTPHQ6ULP2 937 aa17.41■□□□□ 0.38
VPS26A-202ENST00000373382 GALNT7Q86SF2 657 aa17.41■□□□□ 0.38
VPS26A-202ENST00000373382 AKAP14Q86UN6 197 aa17.41■□□□□ 0.38
VPS26A-202ENST00000373382 ARMC8Q8IUR7 673 aa17.41■□□□□ 0.38
VPS26A-202ENST00000373382 CCDC97Q96F63 343 aaPredicted RBP17.41■□□□□ 0.38
VPS26A-202ENST00000373382 PDP1Q9P0J1 537 aaPredicted RBP17.41■□□□□ 0.38
VPS26A-202ENST00000373382 SPATA7Q9P0W8 599 aa17.41■□□□□ 0.38
VPS26A-202ENST00000373382 PER2O15055 1255 aa17.41■□□□□ 0.38
VPS26A-202ENST00000373382 CD40LGP29965 261 aa17.41■□□□□ 0.38
VPS26A-202ENST00000373382 ARHGDIAP52565 204 aa17.41■□□□□ 0.38
VPS26A-202ENST00000373382 GABARAPL2P60520 117 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms