RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 CPNE9Q8IYJ1 553 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 OR7D4Q8NG98 312 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 SLC13A3Q8WWT9 602 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 LRTOMTQ8WZ04 291 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 PMM1Q92871 262 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 ERMAPQ96PL5 475 aaPredicted RBP11.35□□□□□ -0.59
VCL-202ENST00000372755 CITED4Q96RK1 184 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 SLC39A3Q9BRY0 314 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 MOCS1Q9NZB8 636 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 PCDHGC4Q9Y5F7 938 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 DUXAA6NLW8 204 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 TMEM150CB9EJG8 249 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 GABRDO14764 452 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 MID1O15344 667 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 TXNL4AP83876 142 aaKnown RBP11.35□□□□□ -0.59
VCL-202ENST00000372755 GRSF1Q12849 480 aaKnown RBP eCLIP11.35□□□□□ -0.59
VCL-202ENST00000372755 PUM1Q14671 1186 aaKnown RBP eCLIP11.35□□□□□ -0.59
VCL-202ENST00000372755 RFTN1Q14699 578 aaPredicted RBP11.35□□□□□ -0.59
VCL-202ENST00000372755 ALG1LQ6GMV1 187 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 ECHDC2Q86YB7 292 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 WFIKKN2Q8TEU8 576 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 PIWIL1Q96J94 861 aaKnown RBP11.35□□□□□ -0.59
VCL-202ENST00000372755 FKBPLQ9UIM3 349 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 C2orf71A6NGG8 1288 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 ATF6P18850 670 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 AHCYP23526 432 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 NMBRP28336 390 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 SEC13P55735 322 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 FSTL4Q6MZW2 842 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 SMARCD3Q6STE5 483 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 CERS5Q8N5B7 392 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 NATD1Q8N6N6 113 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 NDRG1Q92597 394 aaKnown RBP11.35□□□□□ -0.59
VCL-202ENST00000372755 TMEM109Q9BVC6 243 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 DNAJB9Q9UBS3 223 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 FZD10Q9ULW2 581 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 STXBP5LQ9Y2K9 1186 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 PMF1-BGLAPU3KQ54 211 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 PIK3C2BO00750 1634 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 RAP2AP10114 183 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 YAP1P46937 504 aaKnown RBP11.35□□□□□ -0.59
VCL-202ENST00000372755 OR3A3P47888 321 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 OR3A2P47893 321 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 CLCN4P51793 760 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 CLCNKBP51801 687 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 NRG3P56975 720 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 CYP2U1Q7Z449 544 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 ZNF514Q96K75 400 aaPredicted RBP11.35□□□□□ -0.59
VCL-202ENST00000372755 SNX27Q96L92 541 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 PSKH2Q96QS6 385 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 DUSP26Q9BV47 211 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 OR51V1Q9H2C8 321 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 ANKRA2Q9H9E1 313 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 CIDEBQ9UHD4 219 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 TACSTD2P09758 323 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 PGAM2P15259 253 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 ARL2P36404 184 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 GALK1P51570 392 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 MXD1Q05195 221 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 ZNF234Q14588 700 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 CRY2Q49AN0 593 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 IDNKQ5T6J7 187 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 VWA5B1Q5TIE3 1220 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 TDRPQ86YL5 185 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 GPR151Q8TDV0 419 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 KLRG1Q96E93 195 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 MFSD3Q96ES6 412 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 CNDP2Q96KP4 475 aaKnown RBP11.35□□□□□ -0.59
VCL-202ENST00000372755 B3GALT6Q96L58 329 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 FAM210AQ96ND0 272 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 LENG8Q96PV6 779 aaPredicted RBP11.35□□□□□ -0.59
VCL-202ENST00000372755 RNF121Q9H920 327 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 SERINC1Q9NRX5 453 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 TVP23BQ9NYZ1 205 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 AASSQ9UDR5 926 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 CPQQ9Y646 472 aa11.35□□□□□ -0.59
VCL-202ENST00000372755 ERCC6L2Q5T890 1561 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 SLC38A8A6NNN8 435 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 WASHC1A8K0Z3 465 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 WASH3PC4AMC7 463 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 PSMD9O00233 223 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 LINGO3P0C6S8 592 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 IDH3AP50213 366 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 RORCP51449 518 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 CDKL1Q00532 357 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 WASH2PQ6VEQ5 465 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 CAND1Q86VP6 1230 aaKnown RBP11.34□□□□□ -0.59
VCL-202ENST00000372755 TMEM17Q86X19 198 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 SLC22A15Q8IZD6 547 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 SPATA22Q8NHS9 363 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 NAT14Q8WUY8 206 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 SLC22A18Q96BI1 424 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 MIPEPQ99797 713 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 KXD1Q9BQD3 176 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 FAM234BA2RU67 622 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 CLDN25C9JDP6 229 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 CASRP41180 1078 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 GBX2P52951 348 aaPredicted RBP11.34□□□□□ -0.59
VCL-202ENST00000372755 C1QTNF8P60827 252 aa11.34□□□□□ -0.59
VCL-202ENST00000372755 LIN52Q52LA3 116 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms