RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 RCAN2Q14206 197 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 SF1Q15637 639 aaKnown RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 PSMD5Q16401 504 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 FSCN1Q16658 493 aaKnown RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ATP6AP1LQ52LC2 224 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 SETMARQ53H47 684 aaPredicted RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 C6orf136Q5SQH8 315 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 MARCH8Q5T0T0 291 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 LCE2CQ5TA81 110 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 LETMD1Q6P1Q0 360 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 RANBP10Q6VN20 620 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 HACD2Q6Y1H2 254 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 BHLHA9Q7RTU4 235 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 VTCN1Q7Z7D3 282 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 NLRP8Q86W28 1048 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 PLD3Q8IV08 490 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 MMAAQ8IVH4 418 aaKnown RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 CNTN4Q8IWV2 1026 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 FAM126BQ8IXS8 530 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 NIM1KQ8IY84 436 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 MICU2Q8IYU8 434 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 TCAIMQ8N3R3 496 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 SIDT2Q8NBJ9 832 aaKnown RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 MTMR14Q8NCE2 650 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 LILRB4Q8NHJ6 448 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 PCNPQ8WW12 178 aaKnown RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 RHBDF1Q96CC6 855 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ZHX1-C8orf76Q96EF9 292 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 SLC47A1Q96FL8 570 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ZBED3Q96IU2 234 aaPredicted RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 FYTTD1Q96QD9 318 aaKnown RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ZNF300Q96RE9 604 aaPredicted RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 TUBA1CQ9BQE3 449 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 MMP28Q9H239 520 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 OR51E2Q9H255 320 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ACTR8Q9H981 624 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 TMEM39AQ9NV64 488 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 TMLHEQ9NVH6 421 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 SIRT5Q9NXA8 310 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 GMIPQ9P107 970 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 KIAA1257Q9ULG3 409 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 RNF112Q9ULX5 631 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 STAP1Q9ULZ2 295 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 PIN4Q9Y237 131 aaKnown RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 PKP3Q9Y446 797 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ZNF831Q5JPB2 1677 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 BRCA1P38398 1863 aaKnown RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 RLFQ13129 1914 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 EFCAB9A8MZ26 197 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 SMLR1H3BR10 107 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 DSCR3O14972 297 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 MUSKO15146 869 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 GSTA4O15217 222 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ASNA1O43681 348 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 NUAK1O60285 661 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 NIPSNAP2O75323 286 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 PAGE1O75459 146 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 LRATO95237 230 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ZNF682O95780 498 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 TBX18O95935 607 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 SERPINA1P01009 418 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 PRKCAP17252 672 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 CBLP22681 906 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 S100A1P23297 94 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 KRT20P35900 424 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 TGFBR2P37173 567 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 CCL23P55773 120 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ARPC4P59998 168 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ERVPABLB-1P60509 514 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 SNRPD2P62316 118 aaKnown RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 CREMQ03060 361 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 EMX2Q04743 252 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ABRAXAS2Q15018 415 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ZBTB6Q15916 424 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 UGP2Q16851 508 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 BCL7AQ4VC05 210 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 SIRPB2Q5JXA9 342 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ATAD3CQ5T2N8 411 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 IL27RAQ6UWB1 636 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 TREML4Q6UXN2 200 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 BEND5Q7L4P6 421 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ZNF551Q7Z340 670 aaPredicted RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 DCP2Q8IU60 420 aaKnown RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ZDHHC17Q8IUH5 632 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 MSRB3Q8IXL7 192 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 CCDC116Q8IYX3 515 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 AFAP1L2Q8N4X5 818 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 PARP16Q8N5Y8 322 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 DTX3Q8N9I9 347 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ZNF555Q8NEP9 628 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 RHOXF1Q8NHV9 184 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 TRPM4Q8TD43 1214 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 OSCP1Q8WVF1 389 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 HDAC2Q92769 488 aaKnown RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 PSMG2Q969U7 264 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 FAM162AQ96A26 154 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ISG20Q96AZ6 181 aaKnown RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 FCRL2Q96LA5 508 aaPredicted RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 SLC2A13Q96QE2 648 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms