RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 C6orf136Q5SQH8 315 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 IRGCQ6NXR0 463 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 C17orf64Q86WR6 236 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 DHRSXQ8N5I4 330 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 TEX26Q8N6G2 289 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 LMNTD1Q8N9Z9 388 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 LEMD2Q8NC56 503 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 CD200R1Q8TD46 325 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 NUS1Q96E22 293 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 TRMT2BQ96GJ1 504 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 TRMT61BQ9BVS5 477 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 GRIP2Q9C0E4 1043 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 SLC32A1Q9H598 525 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 A0A088AWK7 358 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 LATO43561 262 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 RPN2P04844 631 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 SPINT3P49223 89 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 ZNF140P52738 457 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 RPL26P61254 145 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 RPS14P62263 151 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 TP53BP2Q13625 1128 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 SPANXN4Q5MJ08 99 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 HTR3DQ70Z44 454 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 AMZ2Q86W34 360 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 P3H2Q8IVL5 708 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 LZICQ8WZA0 190 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 LRRC58Q96CX6 371 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 AURKBQ96GD4 344 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 MYRFLQ96LU7 910 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 C3orf30Q96M34 536 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 AASDHPPTQ9NRN7 309 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 PHPT1Q9NRX4 125 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 PDP2Q9P2J9 529 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 LHX3Q9UBR4 397 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 MROH6A6NGR9 719 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 PDLIM1O00151 329 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 ASLP04424 464 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 C8GP07360 202 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 CTSEP14091 401 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 GM2AP17900 193 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 DDX6P26196 483 aaKnown RBP eCLIP6.98□□□□□ -1.295e-8■■■■□ 23.4
TGFBR3-202ENST00000370399 PRDX6P30041 224 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 CLCNKAP51800 687 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 PLA2G16P53816 162 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 IL5RAQ01344 420 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 CNTN1Q12860 1018 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 CEACAM7Q14002 265 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 NEDD8Q15843 81 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 SLC44A4Q53GD3 710 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 ZNF805Q5CZA5 627 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 TCEAL5Q5H9L2 206 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 TMEM214Q6NUQ4 689 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 OOSP2Q86WS3 158 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 OR2T34Q8NGX1 318 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 OR2T3Q8NH03 318 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 RHEBL1Q8TAI7 183 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 UTP15Q8TED0 518 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 OSCP1Q8WVF1 389 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 CXorf40BQ96DE9 158 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 BBS4Q96RK4 519 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 ZSCAN5AQ9BUG6 496 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 C1QTNF7Q9BXJ2 289 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 UGT2B28Q9BY64 529 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 GSTO2Q9H4Y5 243 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 ZNF556Q9HAH1 456 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 FBXL12Q9NXK8 326 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 SAGE1Q9NXZ1 904 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 C6orf203Q9P0P8 240 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 KCNK6Q9Y257 313 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 PRSS21Q9Y6M0 314 aa6.98□□□□□ -1.29
TGFBR3-202ENST00000370399 DNAH12Q6ZR08 3092 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 hCG_2014768A0A024R1R8 64 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 CACNB4O00305 520 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 CST1P01037 141 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 FCGR1AP12314 374 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 MYCLP1P12525 358 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 HSPA13P48723 471 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 LDLRAP1Q5SW96 308 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 AGTRAPQ6RW13 159 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 TMEM207Q6UWW9 146 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 MTSS1LQ765P7 747 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 ZBTB46Q86UZ6 589 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 CNTN4Q8IWV2 1026 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 RGL4Q8IZJ4 473 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 KRT78Q8N1N4 520 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 SLC43A3Q8NBI5 491 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 SLC13A3Q8WWT9 602 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 HERVK_113Q902F9 699 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 FGF13Q92913 245 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 REPS1Q96D71 796 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 ZNF641Q96N77 438 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 ZBP1Q9H171 429 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 CNOT6Q9ULM6 557 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 ASCC3Q8N3C0 2202 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 A0A1W2PP55 124 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 GSAPA4D1B5 854 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 TTC36A6NLP5 189 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 BBIP1A8MTZ0 92 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 MAP3K13O43283 966 aa6.97□□□□□ -1.29
TGFBR3-202ENST00000370399 ZDHHC11BP0C7U3 371 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms