RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 PCMTD2Q9NV79 361 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 TCFL5Q9UL49 500 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 G3BP2Q9UN86 482 aaKnown RBP10.04□□□□□ -0.8
CLRN3-201ENST00000368671 AAR2Q9Y312 384 aaKnown RBP10.04□□□□□ -0.8
CLRN3-201ENST00000368671 ZNF451Q9Y4E5 1061 aa10.04□□□□□ -0.8
CLRN3-201ENST00000368671 FLNBO75369 2602 aaKnown RBP10.03□□□□□ -0.8
CLRN3-201ENST00000368671 C2orf74A8MZ97 194 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 DPM1O60762 260 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 STK10O94804 968 aaKnown RBP10.03□□□□□ -0.8
CLRN3-201ENST00000368671 SORBS2O94875 1100 aaKnown RBP10.03□□□□□ -0.8
CLRN3-201ENST00000368671 PRSS56P0CW18 603 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 RBP3P10745 1247 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 PRDX3P30048 256 aaKnown RBP10.03□□□□□ -0.8
CLRN3-201ENST00000368671 HADHAP40939 763 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 CDKN1CP49918 316 aaPredicted RBP10.03□□□□□ -0.8
CLRN3-201ENST00000368671 VAV2P52735 878 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 ZNF140P52738 457 aaPredicted RBP10.03□□□□□ -0.8
CLRN3-201ENST00000368671 ITGA1P56199 1179 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 EIF3EP60228 445 aaKnown RBP10.03□□□□□ -0.8
CLRN3-201ENST00000368671 RAPSNQ13702 412 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 SPARCL1Q14515 664 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 ZRANB3Q5FWF4 1079 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 ZNF789Q5FWF6 425 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 C11orf63Q6NUN7 778 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 DARS2Q6PI48 645 aaKnown RBP10.03□□□□□ -0.8
CLRN3-201ENST00000368671 FAM198BQ6UWH4 519 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 SNX20Q7Z614 316 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 AMIGO1Q86WK6 493 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 LURAP1LQ8IV03 231 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 ZBTB2Q8N680 514 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 CCDC110Q8TBZ0 833 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 HEXDCQ8WVB3 486 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 PCSK5Q92824 1860 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 TRAPPC9Q96Q05 1148 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 TBL1YQ9BQ87 522 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 NUDT9Q9BW91 350 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 XKR8Q9H6D3 395 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 SLAMF7Q9NQ25 335 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 ZDHHC3Q9NYG2 299 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 PLEKHB1Q9UF11 243 aaPredicted RBP10.03□□□□□ -0.8
CLRN3-201ENST00000368671 SERTAD3Q9UJW9 196 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 PCDHA13Q9Y5I0 950 aa10.03□□□□□ -0.8
CLRN3-201ENST00000368671 C17orf113A0A1B0GUU1 675 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 AGAP14A8MT82 685 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 C9J4A7 227 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 E7EQ34 232 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 PJA2O43164 708 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 ZNF749O43361 778 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 CEACAM4O75871 244 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 CAPN1P07384 714 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 AGXTP21549 392 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 ACRV1P26436 265 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 PDHA2P29803 388 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 OTX2P32243 289 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 TBX2Q13207 712 aaPredicted RBP10.02□□□□□ -0.81
CLRN3-201ENST00000368671 PRKG2Q13237 762 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 MSLNQ13421 630 aaPredicted RBP10.02□□□□□ -0.81
CLRN3-201ENST00000368671 ATP1A4Q13733 1029 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 NCF4Q15080 339 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 INPP5JQ15735 1006 aaPredicted RBP10.02□□□□□ -0.81
CLRN3-201ENST00000368671 KYNUQ16719 465 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 DEFB110Q30KQ9 67 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 PAPD7Q5XG87 772 aaKnown RBP10.02□□□□□ -0.81
CLRN3-201ENST00000368671 JMJD6Q6NYC1 403 aaPredicted RBP10.02□□□□□ -0.81
CLRN3-201ENST00000368671 ZNF449Q6P9G9 518 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 SARM1Q6SZW1 724 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 CDHR3Q6ZTQ4 885 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 MED25Q71SY5 747 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 VASH1Q7L8A9 365 aaPredicted RBP10.02□□□□□ -0.81
CLRN3-201ENST00000368671 TAS2R42Q7RTR8 314 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 TRIM73Q86UV7 250 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 HOOK3Q86VS8 718 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 SERPINA9Q86WD7 417 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 RAB43Q86YS6 212 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 SSC4DQ8WTU2 575 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 N4BP2L2Q92802 583 aaPredicted RBP10.02□□□□□ -0.81
CLRN3-201ENST00000368671 LRRC45Q96CN5 670 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 SGSM3Q96HU1 749 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 DNAJC1Q96KC8 554 aaKnown RBP10.02□□□□□ -0.81
CLRN3-201ENST00000368671 SPATA13Q96N96 652 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 PITPNM3Q9BZ71 974 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 OR52A5Q9H2C5 316 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 TSPY26PQ9H489 355 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 VPS37BQ9H9H4 285 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 SYTL2Q9HCH5 934 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 CASS4Q9NQ75 786 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 GPR83Q9NYM4 423 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 ACTR10Q9NZ32 417 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 PCDHGB7Q9Y5F8 929 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 DOPEY2Q9Y3R5 2298 aa10.02□□□□□ -0.81
CLRN3-201ENST00000368671 A1L4Q6 167 aa10.01□□□□□ -0.81
CLRN3-201ENST00000368671 CCDC78A2IDD5 438 aa10.01□□□□□ -0.81
CLRN3-201ENST00000368671 LDB2O43679 373 aa10.01□□□□□ -0.81
CLRN3-201ENST00000368671 SEMA7AO75326 666 aa10.01□□□□□ -0.81
CLRN3-201ENST00000368671 RNF224P0DH78 156 aa10.01□□□□□ -0.81
CLRN3-201ENST00000368671 TPH1P17752 444 aa10.01□□□□□ -0.81
CLRN3-201ENST00000368671 PTMSP20962 102 aa10.01□□□□□ -0.81
CLRN3-201ENST00000368671 CTNNA1P35221 906 aaKnown RBP10.01□□□□□ -0.81
CLRN3-201ENST00000368671 CD151P48509 253 aa10.01□□□□□ -0.81
CLRN3-201ENST00000368671 RRADP55042 308 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms