RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 HSD11B1LQ7Z5J1 315 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 ISCA2Q86U28 154 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 PELI3Q8N2H9 469 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 SCAIQ8N9R8 606 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 FAM45AQ8TCE6 357 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 FRS2Q8WU20 508 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 STARD8Q92502 1023 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 CCDC126Q96EE4 140 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 SLC6A17Q9H1V8 727 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 MAGEE1Q9HCI5 957 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 CLEC1BQ9P126 229 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 THEGQ9P2T0 379 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 PTGDR2Q9Y5Y4 395 aa10.46□□□□□ -0.73
TPM3-212ENST00000368533 OR2AG2A6NM03 316 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 TRIM38O00635 465 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 EPHX1P07099 455 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 PKMP14618 531 aaKnown RBP10.46□□□□□ -0.74
TPM3-212ENST00000368533 CES1P23141 567 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 AKT1P31749 480 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 POLD2P49005 469 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 NFATC2Q13469 925 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 ARHGEF7Q14155 803 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 RAB30Q15771 203 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 BCL2A1Q16548 175 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 C2orf27AQ580R0 203 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 ATAT1Q5SQI0 421 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 ANKRD54Q6NXT1 300 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 USP45Q70EL2 814 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 VASH1Q7L8A9 365 aaPredicted RBP10.46□□□□□ -0.74
TPM3-212ENST00000368533 SIX5Q8N196 739 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 HPS1Q92902 700 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 FUBP1Q96AE4 644 aaKnown RBP10.46□□□□□ -0.74
TPM3-212ENST00000368533 ISOC1Q96CN7 298 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 LINGO1Q96FE5 620 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 RETREG1Q9H6L5 497 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 TAS2R13Q9NYV9 303 aa10.46□□□□□ -0.74
TPM3-212ENST00000368533 SNRPB2P08579 225 aaKnown RBP10.45□□□□□ -0.74
TPM3-212ENST00000368533 C1SP09871 688 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 FDXRP22570 491 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 GJA4P35212 333 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 NKX2-5P52952 324 aaPredicted RBP10.45□□□□□ -0.74
TPM3-212ENST00000368533 ZNF234Q14588 700 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 MAPRE2Q15555 327 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 GAB4Q2WGN9 574 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 PDE12Q6L8Q7 609 aaKnown RBP10.45□□□□□ -0.74
TPM3-212ENST00000368533 TDHQ8IZJ6 230 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 PTGR2Q8N8N7 351 aaPredicted RBP10.45□□□□□ -0.74
TPM3-212ENST00000368533 FAR2Q96K12 515 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 FAM83CQ9BQN1 747 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 CEP44Q9C0F1 390 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 NSUN3Q9H649 340 aaKnown RBP10.45□□□□□ -0.74
TPM3-212ENST00000368533 MID1IP1Q9NPA3 183 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 IL36AQ9UHA7 158 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 TRMT6Q9UJA5 497 aaKnown RBP10.45□□□□□ -0.74
TPM3-212ENST00000368533 AP4S1Q9Y587 144 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 A0A1B0GTL3 188 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 NR5A2O00482 541 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 RNASEH2AO75792 299 aaKnown RBP10.45□□□□□ -0.74
TPM3-212ENST00000368533 BCAS2O75934 225 aaPredicted RBP10.45□□□□□ -0.74
TPM3-212ENST00000368533 SLC25A14O95258 325 aaPredicted RBP10.45□□□□□ -0.74
TPM3-212ENST00000368533 NFATC1O95644 943 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 CD1DP15813 335 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 ZNF23P17027 643 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 CD72P21854 359 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 PBLDP30039 288 aaPredicted RBP10.45□□□□□ -0.74
TPM3-212ENST00000368533 ADSLP30566 484 aaPredicted RBP10.45□□□□□ -0.74
TPM3-212ENST00000368533 CAMK2BQ13554 666 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 SKIV2LQ15477 1246 aaKnown RBP10.45□□□□□ -0.74
TPM3-212ENST00000368533 KCNJ8Q15842 424 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 IER5LQ5T953 404 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 GPR107Q5VW38 600 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 REP15Q6BDI9 236 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 CES5AQ6NT32 575 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 MBOAT1Q6ZNC8 495 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 RAB44Q7Z6P3 723 aaPredicted RBP10.45□□□□□ -0.74
TPM3-212ENST00000368533 CATSPER1Q8NEC5 780 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 KLK6Q92876 244 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 FOXJ1Q92949 421 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 SCRN2Q96FV2 425 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 HBEGFQ99075 208 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 CLPBQ9H078 707 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 ZNHIT2Q9UHR6 403 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 CDH7Q9ULB5 785 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 RAB26Q9ULW5 256 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 AURKCQ9UQB9 309 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 ASB1Q9Y576 335 aa10.45□□□□□ -0.74
TPM3-212ENST00000368533 C16orf96A6NNT2 1141 aa10.44□□□□□ -0.74
TPM3-212ENST00000368533 GIPC1O14908 333 aa10.44□□□□□ -0.74
TPM3-212ENST00000368533 SCAMP1O15126 338 aa10.44□□□□□ -0.74
TPM3-212ENST00000368533 TPST1O60507 370 aa10.44□□□□□ -0.74
TPM3-212ENST00000368533 TIE1P35590 1138 aa10.44□□□□□ -0.74
TPM3-212ENST00000368533 CASP2P42575 452 aa10.44□□□□□ -0.74
TPM3-212ENST00000368533 IL12RB1P42701 662 aa10.44□□□□□ -0.74
TPM3-212ENST00000368533 TTPAP49638 278 aa10.44□□□□□ -0.74
TPM3-212ENST00000368533 BMXP51813 675 aa10.44□□□□□ -0.74
TPM3-212ENST00000368533 SLC7A2P52569 658 aa10.44□□□□□ -0.74
TPM3-212ENST00000368533 RUNX3Q13761 415 aa10.44□□□□□ -0.74
TPM3-212ENST00000368533 SQLEQ14534 574 aa10.44□□□□□ -0.74
TPM3-212ENST00000368533 NR1D2Q14995 579 aa10.44□□□□□ -0.74
TPM3-212ENST00000368533 HERC3Q15034 1050 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms