RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 VPS50Q96JG6 964 aa13.52□□□□□ -0.24
SHC1-202ENST00000368445 CMTM6Q9NX76 183 aa13.52□□□□□ -0.24
SHC1-202ENST00000368445 SUCOQ9UBS9 1254 aaKnown RBP13.52□□□□□ -0.24
SHC1-202ENST00000368445 ENO4A6NNW6 628 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 PDLIM1O00151 329 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 TSPAN6O43657 245 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 MOSPD3O75425 235 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 ADH1CP00326 375 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 ATP6V1B2P21281 511 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 VIPR1P32241 457 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 GSK3BP49841 420 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 METAP1P53582 386 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 HTRA4P83105 476 aaPredicted RBP13.52□□□□□ -0.25
SHC1-202ENST00000368445 MESP2Q0VG99 397 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 CHIT1Q13231 466 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 XKR6Q5GH73 641 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 MMAAQ8IVH4 418 aaKnown RBP13.52□□□□□ -0.25
SHC1-202ENST00000368445 CFAP206Q8IYR0 622 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 CATSPER1Q8NEC5 780 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 FOPNLQ96NB1 174 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 SLC24A3Q9HC58 644 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 PTBP2Q9UKA9 531 aaKnown RBP13.52□□□□□ -0.25
SHC1-202ENST00000368445 MYOCOSA0A1B0GUC4 107 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 ARHGEF15O94989 841 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 FGF19O95750 216 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 RPS3P23396 243 aaKnown RBP eCLIP13.52□□□□□ -0.255e-7■■□□□ 12.2
SHC1-202ENST00000368445 B4GALNT1Q00973 533 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 PCBP2Q15366 365 aaKnown RBP eCLIP13.52□□□□□ -0.251e-7■■■■■ 27
SHC1-202ENST00000368445 OTUD3Q5T2D3 398 aaPredicted RBP13.52□□□□□ -0.25
SHC1-202ENST00000368445 NANOGP8Q6NSW7 305 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 CBARPQ8N350 705 aaPredicted RBP13.52□□□□□ -0.25
SHC1-202ENST00000368445 FAM110BQ8TC76 370 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 PROKR1Q8TCW9 393 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 OR52E6Q96RD3 313 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 EBPLQ9BY08 206 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 NANOGQ9H9S0 305 aa13.52□□□□□ -0.25
SHC1-202ENST00000368445 TMEM202A6NGA9 273 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 GFRA2O00451 464 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 GNGT2O14610 69 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 AXIN1O15169 862 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 SMNDC1O75940 238 aaKnown RBP eCLIP13.51□□□□□ -0.251e-10■■■□□ 17.8
SHC1-202ENST00000368445 TIMP2P16035 220 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 DDX6P26196 483 aaKnown RBP eCLIP13.51□□□□□ -0.25
SHC1-202ENST00000368445 GPR1P46091 355 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 ATP4BP51164 291 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 TRAF3Q13114 568 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 PRMT9Q6P2P2 845 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 ANGPTL8Q6UXH0 198 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 GCNT7Q6ZNI0 430 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 PHYKPLQ8IUZ5 450 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 CELF5Q8N6W0 485 aaKnown RBP13.51□□□□□ -0.25
SHC1-202ENST00000368445 ISG20Q96AZ6 181 aaKnown RBP13.51□□□□□ -0.25
SHC1-202ENST00000368445 LRRC3BQ96PB8 259 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 P2RY13Q9BPV8 354 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 SLC32A1Q9H598 525 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 TMEM181Q9P2C4 612 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 MMP20O60882 483 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 PCDH8O95206 1070 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 IL12AP29459 219 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 CTSCP53634 463 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 SPANXN4Q5MJ08 99 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 ADGRG6Q86SQ4 1221 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 HOMEZQ8IX15 550 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 YAF2Q8IY57 180 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 PDLIM5Q96HC4 596 aaKnown RBP13.51□□□□□ -0.25
SHC1-202ENST00000368445 PRPF18Q99633 342 aaKnown RBP13.51□□□□□ -0.25
SHC1-202ENST00000368445 ACAT2Q9BWD1 397 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 CPEB1Q9BZB8 566 aaKnown RBP13.51□□□□□ -0.25
SHC1-202ENST00000368445 OR2AG1Q9H205 316 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 ANAPC1Q9H1A4 1944 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 FAM234BA2RU67 622 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 EPHX1P07099 455 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 ZNF805Q5CZA5 627 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 C12orf40Q86WS4 652 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 ZNF557Q8N988 423 aaPredicted RBP13.51□□□□□ -0.25
SHC1-202ENST00000368445 FBXO30Q8TB52 745 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 SUSD6Q92537 303 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 TMEM79Q9BSE2 394 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 CAAP1Q9H8G2 361 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 BRWD1Q9NSI6 2320 aa13.51□□□□□ -0.25
SHC1-202ENST00000368445 ARPC2O15144 300 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 CYP17A1P05093 508 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 FASP25445 335 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 NAA20P61599 178 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 CDKN3Q16667 212 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 NAIF1Q69YI7 327 aaPredicted RBP13.5□□□□□ -0.25
SHC1-202ENST00000368445 ADGRD2Q7Z7M1 963 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 GPR156Q8NFN8 814 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 CYGBQ8WWM9 190 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 NSMCE2Q96MF7 247 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 ANTXRLA6NF34 631 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 MANBAO00462 879 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 KLK8O60259 260 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 FTH1P02794 183 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 CTSLP07711 333 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 ZNF23P17027 643 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 BDKRB1P46663 353 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 TMEM115Q12893 351 aaPredicted RBP13.5□□□□□ -0.25
SHC1-202ENST00000368445 GRM2Q14416 872 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 TLR1Q15399 786 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms