RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 SNAP47Q5SQN1 464 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 PLEKHS1Q5SXH7 462 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 WDR74Q6RFH5 385 aaPredicted RBP14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 PALM2Q8IXS6 379 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 ZBTB2Q8N680 514 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 OR52E1Q8NGJ3 308 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 LIN37Q96GY3 246 aaPredicted RBP14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 CCDC68Q9H2F9 335 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 EPB41L1Q9H4G0 881 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 MVB12BQ9H7P6 319 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 LATS2Q9NRM7 1088 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 ZFATQ9P243 1243 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 NFS1Q9Y697 457 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 MN1Q10571 1320 aaPredicted RBP14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 A8MU76 341 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 NDUFS1P28331 727 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 PGGT1BP53609 377 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 GABREP78334 506 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 CUL1Q13616 776 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 ACSBG2Q5FVE4 666 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 UBAP2Q5T6F2 1119 aaKnown RBP14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 FOXR1Q6PIV2 292 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 KIAA0408Q6ZU52 694 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 ACVR1CQ8NER5 493 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 CFAP61Q8NHU2 1237 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 HNRNPLLQ8WVV9 542 aaKnown RBP14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 ZFPM2Q8WW38 1151 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 KCNJ9Q92806 393 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 TGM7Q96PF1 710 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 GPR21Q99679 349 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 NRSN2Q9GZP1 204 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 XKR8Q9H6D3 395 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 PDP2Q9P2J9 529 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 CIDEBQ9UHD4 219 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 CCDC187A0A096LP49 1063 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 TCRBV9S1A1TA0A576 114 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 CXorf49A8MYA2 514 aaPredicted RBP14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 KPNA5O15131 536 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 CAPN5O15484 640 aaPredicted RBP14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 C1QAP02745 245 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 CAPNS1P04632 268 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 TNFRSF8P28908 595 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 CYP4F3Q08477 520 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 RTP5Q14D33 572 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 GALNT7Q86SF2 657 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 OR4E2Q8NGC2 313 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 OR5K2Q8NHB8 316 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 GABPB2Q8TAK5 448 aaPredicted RBP14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 CD200R1Q8TD46 325 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 AENQ8WTP8 325 aaKnown RBP14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 GRAMD1AQ96CP6 724 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 PRR11Q96HE9 360 aaPredicted RBP14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 STRADBQ9C0K7 418 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 LRRC4CQ9HCJ2 640 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 PLAGL1Q9UM63 463 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 TDRKHQ9Y2W6 561 aaKnown RBP14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 CHD8Q9HCK8 2581 aa14.66□□□□□ -0.06
SMPDL3A-201ENST00000368440 KRT87PA6NCN2 255 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 OR6C74A6NCV1 312 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 OR5K3A6NET4 321 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 KIF1CO43896 1103 aaKnown RBP14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 C9P02748 559 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 CDKN2DP55273 166 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 IRGCQ6NXR0 463 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 C3orf62Q6ZUJ4 267 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 RAB11FIP2Q7L804 512 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 TBC1D21Q8IYX1 336 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 LCN9Q8WX39 176 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 NXPE2Q96DL1 559 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 CNTNAP3BQ96NU0 1288 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 DPYSL5Q9BPU6 564 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 CNTNAP3Q9BZ76 1288 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 TRIT1Q9H3H1 467 aaKnown RBP14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 POLR1BQ9H9Y6 1135 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 ICKQ9UPZ9 632 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 LOXL2Q9Y4K0 774 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 COMMD10Q9Y6G5 202 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 BRINP1O60477 761 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 ITIH1P19827 911 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 ETV5P41161 510 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 BDKRB1P46663 353 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 GRB7Q14451 532 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 FAM92BQ6ZTR7 304 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 ARHGAP22Q7Z5H3 698 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 STRA8Q7Z7C7 330 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 PLXDC1Q8IUK5 500 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 LMNTD1Q8N9Z9 388 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 WDR36Q8NI36 951 aaKnown RBP14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 SKA2Q8WVK7 121 aaPredicted RBP14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 TFB2MQ9H5Q4 396 aaKnown RBP14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 HRASLS2Q9NWW9 162 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 DHRS7Q9Y394 339 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 AK5Q9Y6K8 562 aa14.65□□□□□ -0.06
SMPDL3A-201ENST00000368440 KNTC1P50748 2209 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 FAM159BA6NKW6 160 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 TMX2-CTNND1H3BSU7 103 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 BTN3A3O00478 584 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 PLD2O14939 933 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 SASH3O75995 380 aa14.64□□□□□ -0.07
SMPDL3A-201ENST00000368440 POLR2CP19387 275 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms