RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 XAB2Q9HCS7 855 aaKnown RBP18.39■□□□□ 0.53
CKS1B-203ENST00000368439 ASF1AQ9Y294 204 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 BTRCQ9Y297 605 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 SPTBP11277 2137 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 FAM237BA0A1B0GVD1 139 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 GOLGA8KD6RF30 607 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 F8W8V4 182 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 GOLGA8TH3BQL2 631 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 GOLGA8MH3BSY2 632 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 TK2O00142 265 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 MATN2O00339 956 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 SPAG6O75602 509 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 SLCO2B1O94956 709 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 ZBTB11O95625 1053 aaPredicted RBP18.38■□□□□ 0.53
CKS1B-203ENST00000368439 PRDX3P30048 256 aaKnown RBP18.38■□□□□ 0.53
CKS1B-203ENST00000368439 PTGIRP43119 386 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 CSE1LP55060 971 aaKnown RBP18.38■□□□□ 0.53
CKS1B-203ENST00000368439 GNG11P61952 73 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 ABHD18Q0P651 414 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 PRKAA1Q13131 559 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 CTSL3PQ5NE16 218 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 RNASEH2BQ5TBB1 312 aaKnown RBP18.38■□□□□ 0.53
CKS1B-203ENST00000368439 ARMC6Q6NXE6 501 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 TMEM135Q86UB9 458 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 LRRC6Q86X45 466 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 PPP1R3BQ86XI6 285 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 SLC39A7Q92504 469 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 LPGAT1Q92604 370 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 ELMO2Q96JJ3 720 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 SIGLEC10Q96LC7 697 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 ULBP3Q9BZM4 244 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 TRIT1Q9H3H1 467 aaKnown RBP18.38■□□□□ 0.53
CKS1B-203ENST00000368439 C1GALT1Q9NS00 363 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 PCYOX1Q9UHG3 505 aa18.38■□□□□ 0.53
CKS1B-203ENST00000368439 ZCWPW2A0A1B0GU75 182 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 MAGEB16A2A368 324 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 SLC9B1P1A6NJY1 282 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 SDR42E2A6NKP2 422 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 NDUFS3O75489 264 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 KIAA0754O94854 1291 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 ACY1Q03154 408 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 HSPA14Q0VDF9 509 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 TUBB3Q13509 450 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 LINC00303Q3SY05 128 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 ANKRD20A4Q4UJ75 823 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 MRNIPQ6NTE8 343 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 UNC5AQ6ZN44 842 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 CENPUQ71F23 418 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 PPIL6Q8IXY8 311 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 FLVCR1-AS1Q8TAF5 88 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 ASZ1Q8WWH4 475 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 ZNF501Q96CX3 271 aaPredicted RBP18.37■□□□□ 0.53
CKS1B-203ENST00000368439 TSSK1BQ9BXA7 367 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 FGF21Q9NSA1 209 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 IL1RAPL1Q9NZN1 696 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 POLG2Q9UHN1 485 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 GNPTGQ9UJJ9 305 aa18.37■□□□□ 0.53
CKS1B-203ENST00000368439 GSAPA4D1B5 854 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 TERTO14746 1132 aaKnown RBP18.36■□□□□ 0.53
CKS1B-203ENST00000368439 C1QL1O75973 258 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 PRB1P04280 392 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 OGNP20774 298 aaKnown RBP18.36■□□□□ 0.53
CKS1B-203ENST00000368439 CDH3P22223 829 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 IVDP26440 423 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 SHMT2P34897 504 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 STAT5AP42229 794 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 ADARP55265 1226 aaKnown RBP18.36■□□□□ 0.53
CKS1B-203ENST00000368439 TUBB4BP68371 445 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 CYP4F2P78329 520 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 PTK6Q13882 451 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 TUBB2AQ13885 445 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 GRB7Q14451 532 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 GPR19Q15760 415 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 DNAJC21Q5F1R6 531 aaKnown RBP18.36■□□□□ 0.53
CKS1B-203ENST00000368439 PTRHD1Q6GMV3 140 aaKnown RBP18.36■□□□□ 0.53
CKS1B-203ENST00000368439 PWWP2BQ6NUJ5 590 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 CASC4Q6P4E1 433 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 CYB5D1Q6P9G0 228 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 BPHLQ86WA6 291 aaPredicted RBP18.36■□□□□ 0.53
CKS1B-203ENST00000368439 RASGRP3Q8IV61 690 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 UNC5BQ8IZJ1 945 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 ESX1Q8N693 406 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 GALNT6Q8NCL4 622 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 FCRL4Q96PJ5 515 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 PANX3Q96QZ0 392 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 TCF12Q99081 682 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 MENTQ9BUN1 341 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 TUBB2BQ9BVA1 445 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 PDE7BQ9NP56 450 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 ACTR10Q9NZ32 417 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 RARRES3Q9UL19 164 aa18.36■□□□□ 0.53
CKS1B-203ENST00000368439 C2orf74A8MZ97 194 aa18.35■□□□□ 0.53
CKS1B-203ENST00000368439 DNALI1O14645 258 aaPredicted RBP18.35■□□□□ 0.53
CKS1B-203ENST00000368439 APOA4P06727 396 aa18.35■□□□□ 0.53
CKS1B-203ENST00000368439 ST6GAL1P15907 406 aa18.35■□□□□ 0.53
CKS1B-203ENST00000368439 EIF3BP55884 814 aaKnown RBP18.35■□□□□ 0.53
CKS1B-203ENST00000368439 DHX34Q14147 1143 aaKnown RBP18.35■□□□□ 0.53
CKS1B-203ENST00000368439 PPP1R7Q15435 360 aa18.35■□□□□ 0.53
CKS1B-203ENST00000368439 ZNF789Q5FWF6 425 aa18.35■□□□□ 0.53
CKS1B-203ENST00000368439 NEPROQ6NW34 567 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms