RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 TCP11Q8WWU5 503 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 EID2BQ96D98 161 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 RPGRIP1Q96KN7 1286 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 BBC3Q96PG8 261 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 PNKPQ96T60 521 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 C19orf43Q9BQ61 176 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 EDEM2Q9BV94 578 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 CARD6Q9BX69 1037 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 MRPL37Q9BZE1 423 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 KLHL4Q9C0H6 718 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 USP44Q9H0E7 712 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 MUC13Q9H3R2 512 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 SH2D4AQ9H788 454 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 LRRC40Q9H9A6 602 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 HEYLQ9NQ87 328 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 FARSBQ9NSD9 589 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 CENPMQ9NSP4 180 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 BABAM1Q9NWV8 329 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 HCFC1R1Q9NWW0 138 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 ANKFY1Q9P2R3 1169 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 HMGXB4Q9UGU5 601 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 DMRT1Q9Y5R6 373 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 SPACA6W5XKT8 324 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 DMXL2Q8TDJ6 3036 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 IGSF10Q6WRI0 2623 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 CCDC195A0A1B0GUA6 201 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 C5orf51A6NDU8 294 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 GOLGA6L10A6NI86 522 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 UNC119BA6NIH7 251 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 SRRM3A6NNA2 597 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 TMEM232C9JQI7 657 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 H0Y8G0 127 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 PEX1O43933 1283 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 DUSP11O75319 330 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 NEBLO76041 1014 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 SUN1O94901 812 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 AKR7A3O95154 331 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 ZFPL1O95159 310 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 SPDEFO95238 335 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 GLP2RO95838 553 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 SNAI1O95863 264 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 HLA-DRAP01903 254 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 PGK2P07205 417 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 CYC1P08574 325 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 HOXB7P09629 217 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 IQCF3P0C7M6 154 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 ATXN1LP0C7T5 689 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 PRPS2P11908 318 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 KRT3P12035 628 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 TPH1P17752 444 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 EGR1P18146 543 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 NR2F2P24468 414 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 DDX6P26196 483 aaKnown RBP eCLIP5.02□□□□□ -1.612e-7■■■□□ 18.3
ECHDC1-204ENST00000368292 U2AF2P26368 475 aaKnown RBP eCLIP5.02□□□□□ -1.618e-7■■■■□ 25.7
ECHDC1-204ENST00000368292 TNFRSF8P28908 595 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 PCGF2P35227 344 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 GATMP50440 423 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 HSD17B4P51659 736 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 CLCN5P51795 746 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 METAP1P53582 386 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 HSD11B2P80365 405 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 PMP22Q01453 160 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 MC2RQ01718 297 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 LIPEQ05469 1076 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 SCAPQ12770 1279 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 TP53BP2Q13625 1128 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 GCKRQ14397 625 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 KCNAB1Q14722 419 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 SEC23BQ15437 767 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 BCL2A1Q16548 175 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 EPC2Q52LR7 807 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 ZRANB3Q5FWF4 1079 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 LY6G5CQ5SRR4 150 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 ATAD3BQ5T9A4 648 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 RIPPLY2Q5TAB7 128 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 CASC4Q6P4E1 433 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 DEGS2Q6QHC5 323 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 USP17L6PQ6QN14 398 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 TMEM270Q6UE05 265 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 CXCL17Q6UXB2 119 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 MFSD7Q6UXD7 560 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 ADGRA1Q86SQ6 560 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 LDLRAD3Q86YD5 345 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 CCDC117Q8IWD4 279 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 DDIASQ8IXT1 998 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 RASGEF1CQ8N431 466 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 SFRP1Q8N474 314 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 OR8K5Q8NH50 307 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 NCSTNQ92542 709 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 HDAC11Q96DB2 347 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 C12orf42Q96LP6 360 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 GDAP1L1Q96MZ0 367 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 ABHD1Q96SE0 405 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 C9orf16Q9BUW7 83 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 HEMGNQ9BXL5 484 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 KRTAP4-5Q9BYR2 181 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 GPR61Q9BZJ8 451 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 SPATC1LQ9H0A9 340 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 PCDHAC1Q9H158 963 aa5.02□□□□□ -1.61
ECHDC1-204ENST00000368292 ST6GALNAC4Q9H4F1 302 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms