RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 SMARCB1Q12824 385 aa9.16□□□□□ -0.94
VPS13A-203ENST00000360280 FAPQ12884 760 aa9.16□□□□□ -0.94
VPS13A-203ENST00000360280 PACRGLQ8N7B6 248 aa9.16□□□□□ -0.94
VPS13A-203ENST00000360280 FUZQ9BT04 418 aa9.16□□□□□ -0.94
VPS13A-203ENST00000360280 PRPS2P11908 318 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 CCKBRP32239 447 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 NMUR2Q9GZQ4 415 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 DCSTAMPQ9H295 470 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 TMLHEQ9NVH6 421 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 AGAP2Q99490 1192 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 LRRC3Q9BY71 257 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 DEFB129Q9H1M3 183 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 PNPOQ9NVS9 261 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 KCTD5Q9NXV2 234 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 FBXO5Q9UKT4 447 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 RYKP34925 604 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 DLSTP36957 453 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 SCGB2A2Q13296 93 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 BORAQ6PGQ7 559 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 MAP4K3Q8IVH8 894 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 TPST2O60704 377 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 CYP11A1P05108 521 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 C8BP07358 591 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 RGS6P49758 472 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 FASTKD3Q14CZ7 662 aaKnown RBP9.15□□□□□ -0.94
VPS13A-203ENST00000360280 IFI44LQ53G44 452 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 MSANTD2Q6P1R3 559 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 DCDC5Q6ZRR9 648 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 HCAR2Q8TDS4 363 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 ARL8BQ9NVJ2 186 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 TIMM13Q9Y5L4 95 aaPredicted RBP9.15□□□□□ -0.94
VPS13A-203ENST00000360280 CAP2P40123 477 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 RAB39AQ14964 217 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 ZBTB2Q8N680 514 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 TNFRSF25Q93038 417 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 EXOSC8Q96B26 276 aaKnown RBP9.15□□□□□ -0.94
VPS13A-203ENST00000360280 TOB1P50616 345 aaPredicted RBP9.15□□□□□ -0.94
VPS13A-203ENST00000360280 MVKQ03426 396 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 KLF10Q13118 480 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 DNASE1L3Q13609 305 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 MYO19Q96H55 970 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 PRMT6Q96LA8 375 aaPredicted RBP9.15□□□□□ -0.94
VPS13A-203ENST00000360280 HIPK3Q9H422 1215 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 GPR75-ASB3A0A0A6YYF3 556 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 RPL26P61254 145 aaKnown RBP9.15□□□□□ -0.94
VPS13A-203ENST00000360280 PROKR2Q8NFJ6 384 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 ACTR6Q9GZN1 396 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 PCDHB16Q9NRJ7 776 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 TNFRSF10DQ9UBN6 386 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 C5orf60A6NFR6 353 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 KCNU1A8MYU2 1149 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 RECQL4O94761 1208 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 ASGR1P07306 291 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 INSRRP14616 1297 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 GLDCP23378 1020 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 HTR7P34969 479 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 SLC6A9P48067 706 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF181Q2M3W8 571 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 ZBED5Q49AG3 693 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 HSFY1Q96LI6 401 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 ITPAQ9BY32 194 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 DUSP16Q9BY84 665 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 MYNNQ9NPC7 610 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 MRPL17Q9NRX2 175 aaKnown RBP9.15□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF226Q9NYT6 803 aa9.15□□□□□ -0.94
VPS13A-203ENST00000360280 MYH14Q7Z406 1995 aaKnown RBP9.15□□□□□ -0.95
VPS13A-203ENST00000360280 PTPN9P43378 593 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 CDH8P55286 799 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 CDH13P55290 713 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 OR8D1Q8WZ84 308 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 OR6C6A6NF89 314 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 RPP40O75818 363 aaKnown RBP9.15□□□□□ -0.95
VPS13A-203ENST00000360280 ARL6IP5O75915 188 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 ARP10275 920 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 ASB18Q6ZVZ8 466 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 TOR1AIP2Q8NFQ8 470 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 BORCS8Q96FH0 119 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 KATNBL1Q9H079 304 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF446Q9NWS9 450 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 TAS2R10Q9NYW0 307 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 HSPB11Q9Y547 144 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 PLD2O14939 933 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 C2orf80Q0P641 193 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 WDSUB1Q8N9V3 476 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 EPS8L1Q8TE68 723 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 LRTOMTQ8WZ04 291 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 hCG_2039718K7EN88 272 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 HK1P19367 917 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 UGT2B10P36537 528 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 PARP15Q460N3 678 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 OR5K1Q8NHB7 308 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 SLC44A1Q8WWI5 657 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 PBDC1Q9BVG4 233 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 LRRC4CQ9HCJ2 640 aa9.15□□□□□ -0.95
VPS13A-203ENST00000360280 MADCAM1Q13477 382 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 TMEM119Q4V9L6 283 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 NCSTNQ92542 709 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 MSANTD3Q96H12 275 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 CD93Q9NPY3 652 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 B3GAT2Q9NPZ5 323 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms