RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 CHPFQ8IZ52 775 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 NKAPQ8N5F7 415 aaKnown RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 LINC00469Q8N7U9 141 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 LILRB1Q8NHL6 650 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 RHEBL1Q8TAI7 183 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 AGAP11Q8TF27 550 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 TWIST2Q8WVJ9 160 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 INPP5DQ92835 1189 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 RCN3Q96D15 328 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 MTFMTQ96DP5 389 aaKnown RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 L3HYPDHQ96EM0 354 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 FAM129BQ96TA1 746 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 PRPF18Q99633 342 aaKnown RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 NPAS2Q99743 824 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 C1orf50Q9BV19 199 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 SLC2A11Q9BYW1 496 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 TRIM8Q9BZR9 551 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 CAAP1Q9H8G2 361 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 NOL11Q9H8H0 719 aaKnown RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 POPDC3Q9HBV1 291 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 ZDHHC3Q9NYG2 299 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 CCDC167Q9P0B6 97 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 SERGEFQ9UGK8 458 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 ATPIF1Q9UII2 106 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 SCOCQ9UIL1 159 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 LNPEPQ9UIQ6 1025 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 PCTPQ9UKL6 214 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 SLC8A2Q9UPR5 921 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 PCYT1BQ9Y5K3 369 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 E2F3O00716 465 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 MID1O15344 667 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 CFLARO15519 480 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 TAPBPO15533 448 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 FFAR2O15552 330 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 TSPAN6O43657 245 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 PEX11AO75192 247 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 CRCPO75575 148 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 STAMBPO95630 424 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 PSMC3P17980 439 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 AOC1P19801 751 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 CD72P21854 359 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 PDHA2P29803 388 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 CPOXP36551 454 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 LTBRP36941 435 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 SLC26A3P40879 764 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 HTR6P50406 440 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 NUDT2P50583 147 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 COPAP53621 1224 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 PKNOX1P55347 436 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 ERVPABLB-1P60509 514 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 ATP6V0D1P61421 351 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 POLR2LP62875 67 aaKnown RBP4.98□□□□□ -1.61
ATXN3-202ENST00000359366 PLOD1Q02809 727 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-202ENST00000359366 CNTN1Q12860 1018 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 ABRQ12979 859 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 COL9A2Q14055 689 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-202ENST00000359366 RAB30Q15771 203 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 CCDC85BQ15834 202 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-202ENST00000359366 ZXDCQ2QGD7 858 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-202ENST00000359366 CCSMST1Q4G0I0 132 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 ATAT1Q5SQI0 421 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 DEPDC1Q5TB30 811 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 KIAA1211LQ6NV74 962 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 DOK6Q6PKX4 331 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 SLC2A7Q6PXP3 512 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 PAOXQ6QHF9 649 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 CERS6Q6ZMG9 384 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 LAPTM4BQ86VI4 370 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 DEFB107AQ8IZN7 70 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 RASGEF1AQ8N9B8 481 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 PLA2G15Q8NCC3 412 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 FAM156AQ8NDB6 213 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 TNIP2Q8NFZ5 429 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 OR2T11Q8NH01 316 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 DTX3LQ8TDB6 740 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 SUSD6Q92537 303 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 ELMO1Q92556 727 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 AP2M1Q96CW1 435 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 C19orf60Q96EN9 201 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 MYOCQ99972 504 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 AKTIPQ9H8T0 292 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 IL1RL2Q9HB29 575 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 EML4Q9HC35 981 aaKnown RBP4.98□□□□□ -1.61
ATXN3-202ENST00000359366 CD93Q9NPY3 652 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 PRSS16Q9NQE7 514 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 FARSBQ9NSD9 589 aaKnown RBP4.98□□□□□ -1.61
ATXN3-202ENST00000359366 THG1LQ9NWX6 298 aaKnown RBP4.98□□□□□ -1.61
ATXN3-202ENST00000359366 GDE1Q9NZC3 331 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 PKD2L2Q9NZM6 624 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 GMPR2Q9P2T1 348 aaKnown RBP4.98□□□□□ -1.61
ATXN3-202ENST00000359366 ZNHIT2Q9UHR6 403 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 PPM1HQ9ULR3 514 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 SLC27A6Q9Y2P4 619 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 PPIL1Q9Y3C6 166 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 FAM32AQ9Y421 112 aaKnown RBP4.98□□□□□ -1.61
ATXN3-202ENST00000359366 LRRC42Q9Y546 428 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 CROCCQ5TZA2 2017 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 PLXNA2O75051 1894 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 A0A1W2PQ67 120 aa4.98□□□□□ -1.61
ATXN3-202ENST00000359366 AZIN1O14977 448 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms