RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 RSL1D1O76021 490 aaKnown RBP12.03□□□□□ -0.48
COL20A1-201ENST00000358894 PRKD3O94806 890 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 ITGBL1O95965 494 aaPredicted RBP12.03□□□□□ -0.48
COL20A1-201ENST00000358894 RAP2AP10114 183 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 DBTP11182 482 aaKnown RBP12.03□□□□□ -0.48
COL20A1-201ENST00000358894 VARSP26640 1264 aaKnown RBP12.03□□□□□ -0.48
COL20A1-201ENST00000358894 FBXL19Q6PCT2 694 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 SNX20Q7Z614 316 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 RAB42Q8N4Z0 105 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 C2orf73Q8N5S3 287 aaPredicted RBP12.03□□□□□ -0.48
COL20A1-201ENST00000358894 RANBP9Q96S59 729 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 RTP3Q9BQQ7 232 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 OSBPL10Q9BXB5 764 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 ABCB8Q9NUT2 735 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 EXD2Q9NVH0 621 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 DNAJC11Q9NVH1 559 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 TBCCD1Q9NVR7 557 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 AP3M1Q9Y2T2 418 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 EP400Q96L91 3159 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 SERPINA1P01009 418 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 HPCAL1P37235 193 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 CASP9P55211 416 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 MADCAM1Q13477 382 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 CCNYL2Q5T2Q4 361 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 ZC3H7AQ8IWR0 971 aaKnown RBP12.03□□□□□ -0.48
COL20A1-201ENST00000358894 ZFP28Q8NHY6 868 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 RHEBL1Q8TAI7 183 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 KCNJ9Q92806 393 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 C1QTNF1Q9BXJ1 281 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 RPS6KA6Q9UK32 745 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 K7ERQ8 282 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 TRBC1P01850 177 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 GALTP07902 379 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 IGFBP5P24593 272 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 CYP4F2P78329 520 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 C18orf21Q32NC0 220 aaPredicted RBP12.03□□□□□ -0.48
COL20A1-201ENST00000358894 MPPE1Q53F39 396 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 INTS11Q5TA45 600 aaKnown RBP12.03□□□□□ -0.48
COL20A1-201ENST00000358894 LEMD2Q8NC56 503 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 AURKBQ96GD4 344 aaPredicted RBP12.03□□□□□ -0.48
COL20A1-201ENST00000358894 KRT84Q9NSB2 600 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 STMN3Q9NZ72 180 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 ZIM2Q9NZV7 527 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 VPS51Q9UID3 782 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 RABL2BQ9UNT1 228 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 KCNE2Q9Y6J6 123 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 SOCS2O14508 198 aa12.02□□□□□ -0.48
COL20A1-201ENST00000358894 TULP3O75386 442 aa12.02□□□□□ -0.48
COL20A1-201ENST00000358894 NSG1P42857 185 aa12.02□□□□□ -0.48
COL20A1-201ENST00000358894 HTR6P50406 440 aa12.02□□□□□ -0.48
COL20A1-201ENST00000358894 NFKB2Q00653 900 aa12.02□□□□□ -0.48
COL20A1-201ENST00000358894 DGUOKQ16854 277 aa12.02□□□□□ -0.48
COL20A1-201ENST00000358894 DEFB115Q30KQ5 88 aa12.02□□□□□ -0.48
COL20A1-201ENST00000358894 ZNF697Q5TEC3 545 aa12.02□□□□□ -0.48
COL20A1-201ENST00000358894 CNTN4Q8IWV2 1026 aa12.02□□□□□ -0.48
COL20A1-201ENST00000358894 PIANPQ8IYJ0 282 aa12.02□□□□□ -0.48
COL20A1-201ENST00000358894 PHACTR4Q8IZ21 702 aa12.02□□□□□ -0.48
COL20A1-201ENST00000358894 IFT80Q9P2H3 777 aaPredicted RBP12.02□□□□□ -0.48
COL20A1-201ENST00000358894 ITM2BQ9Y287 266 aa12.02□□□□□ -0.48
COL20A1-201ENST00000358894 RNF11Q9Y3C5 154 aa12.02□□□□□ -0.48
COL20A1-201ENST00000358894 SHROOM3Q8TF72 1996 aa12.02□□□□□ -0.48
COL20A1-201ENST00000358894 SNAP29O95721 258 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 CYBAP13498 195 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 PRKACGP22612 351 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 RING1Q06587 406 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 CNTN1Q12860 1018 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 DAG1Q14118 895 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 TCEA2Q15560 299 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 BEND5Q7L4P6 421 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 TMPRSS11BQ86T26 416 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 SLCO6A1Q86UG4 719 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 CDH24Q86UP0 819 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 COLGALT2Q8IYK4 626 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 SVOPQ8N4V2 548 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 KLHDC9Q8NEP7 349 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 ASZ1Q8WWH4 475 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 OCEL1Q9H607 264 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 PDP1Q9P0J1 537 aaPredicted RBP12.02□□□□□ -0.49
COL20A1-201ENST00000358894 KIAA0100Q14667 2235 aaKnown RBP12.02□□□□□ -0.49
COL20A1-201ENST00000358894 A0A1W2PRU2 124 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 C2orf78A6NCI8 922 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 H3BN98 237 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 FPGTO14772 594 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 BCKDKO14874 412 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 DENRO43583 198 aaKnown RBP12.02□□□□□ -0.49
COL20A1-201ENST00000358894 PCDH8O95206 1070 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 LAPTM4AQ15012 233 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 INO80DQ53TQ3 878 aaPredicted RBP12.02□□□□□ -0.49
COL20A1-201ENST00000358894 PEX5LQ8IYB4 626 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 CMTM8Q8IZV2 173 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 ST13P5Q8NFI4 369 aaPredicted RBP12.02□□□□□ -0.49
COL20A1-201ENST00000358894 HM13Q8TCT9 377 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 CLP1Q92989 425 aaKnown RBP12.02□□□□□ -0.49
COL20A1-201ENST00000358894 FUBP1Q96AE4 644 aaKnown RBP12.02□□□□□ -0.49
COL20A1-201ENST00000358894 RBM4BQ9BQ04 359 aaKnown RBP12.02□□□□□ -0.49
COL20A1-201ENST00000358894 RBM4Q9BWF3 364 aaKnown RBP12.02□□□□□ -0.49
COL20A1-201ENST00000358894 SGK2Q9HBY8 427 aa12.02□□□□□ -0.49
COL20A1-201ENST00000358894 CCM2LQ9NUG4 571 aaPredicted RBP12.02□□□□□ -0.49
COL20A1-201ENST00000358894 ARVCFO00192 962 aa12.01□□□□□ -0.49
COL20A1-201ENST00000358894 PSMD11O00231 422 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms