RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 GMEB1Q9Y692 573 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 ZNF106Q9H2Y7 1883 aaKnown RBP8.42□□□□□ -1.06
RFX3-202ENST00000358730 GLYATL1P3A0A0U1RQE8 302 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 ELOVL7A1L3X0 281 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 A8MX80 341 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 K7EPI3 171 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 MAGEB3O15480 346 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 HOXA2O43364 376 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 CLDN7O95471 211 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 GGT5P36269 586 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 GNPDA1P46926 289 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 TM4SF4P48230 202 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 GTDC1Q4AE62 458 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 SPESP1Q6UW49 350 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 NECAB2Q7Z6G3 386 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 THAP5Q7Z6K1 395 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 MSRB3Q8IXL7 192 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 RGL4Q8IZJ4 473 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 HS3ST5Q8IZT8 346 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 DCAF4L2Q8NA75 395 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 HJURPQ8NCD3 748 aaPredicted RBP8.42□□□□□ -1.06
RFX3-202ENST00000358730 GLB1L3Q8NCI6 653 aaPredicted RBP8.42□□□□□ -1.06
RFX3-202ENST00000358730 TUBA1CQ9BQE3 449 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 ACTR8Q9H981 624 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 DNAJB9Q9UBS3 223 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 TRPS1Q9UHF7 1281 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 INVSQ9Y283 1065 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 YIPF1Q9Y548 306 aa8.42□□□□□ -1.06
RFX3-202ENST00000358730 LOC730098B7Z3J9 87 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 CXCR6O00574 342 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 NOBOXO60393 691 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 TRBC1P01850 177 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 IL6P05231 212 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 EPB42P16452 691 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 BPIP17213 487 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 CD247P20963 164 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 MAP4P27816 1152 aaKnown RBP8.41□□□□□ -1.06
RFX3-202ENST00000358730 ALDH7A1P49419 539 aaKnown RBP8.41□□□□□ -1.06
RFX3-202ENST00000358730 BCL2L1Q07817 233 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 ARHGEF7Q14155 803 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 GPNMBQ14956 572 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 TCTN1Q2MV58 587 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 SUSD1Q6UWL2 747 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 GCNT7Q6ZNI0 430 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 PHACTR4Q8IZ21 702 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 OR13F1Q8NGS4 319 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 SLC22A17Q8WUG5 538 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 OR52E6Q96RD3 313 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 SH3GL1Q99961 368 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 LTB4R2Q9NPC1 389 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 TMEM9Q9P0T7 183 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 AFF4Q9UHB7 1163 aaKnown RBP8.41□□□□□ -1.06
RFX3-202ENST00000358730 OR51B4Q9Y5P0 310 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 MANBAO00462 879 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 SMAD6O43541 496 aaKnown RBP8.41□□□□□ -1.06
RFX3-202ENST00000358730 PRKD3O94806 890 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 WDR47O94967 919 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 MATN1P21941 496 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 PIGAP37287 484 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 PPP1R8Q12972 351 aaKnown RBP8.41□□□□□ -1.06
RFX3-202ENST00000358730 VEPH1Q14D04 833 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 CHRNA6Q15825 494 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 TBC1D25Q3MII6 688 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 TTC23Q5W5X9 447 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 FAM117BQ6P1L5 589 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 ELMSAN1Q6PJG2 1045 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 TRIM46Q7Z4K8 759 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 R3HCC1LQ7Z5L2 792 aaKnown RBP8.41□□□□□ -1.06
RFX3-202ENST00000358730 ZBTB46Q86UZ6 589 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 SLC43A3Q8NBI5 491 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 ZNF555Q8NEP9 628 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 UBTD2Q8WUN7 234 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 MTFMTQ96DP5 389 aaKnown RBP8.41□□□□□ -1.06
RFX3-202ENST00000358730 NRBF2Q96F24 287 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 AURKBQ96GD4 344 aaPredicted RBP8.41□□□□□ -1.06
RFX3-202ENST00000358730 RDH12Q96NR8 316 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 SLC22A12Q96S37 553 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 VN1R3Q9BXE9 311 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 CLMPQ9H6B4 373 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 HPS4Q9NQG7 708 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 ZNHIT2Q9UHR6 403 aa8.41□□□□□ -1.06
RFX3-202ENST00000358730 ABT1Q9ULW3 272 aaKnown RBP8.41□□□□□ -1.06
RFX3-202ENST00000358730 SH3PXD2BA1X283 911 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 ABCB7O75027 752 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 E2F6O75461 281 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 EBLN1P0CF75 366 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 CCNA2P20248 432 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 CRHBPP24387 322 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 HNF1BP35680 557 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 SPAM1P38567 509 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 PPP2R2BQ00005 443 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 SEMG2Q02383 582 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 BNIP3Q12983 259 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 CPSF6Q16630 551 aaKnown RBP eCLIP8.4□□□□□ -1.06
RFX3-202ENST00000358730 SMU1Q2TAY7 513 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 TTLL9Q3SXZ7 439 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 RBM48Q5RL73 367 aaKnown RBP8.4□□□□□ -1.06
RFX3-202ENST00000358730 GPRC6AQ5T6X5 926 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 MICU2Q8IYU8 434 aa8.4□□□□□ -1.06
RFX3-202ENST00000358730 ADGRG2Q8IZP9 1017 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms