RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 CNTNAP1P78357 1384 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 DNMT1P26358 1616 aaKnown RBP8.74□□□□□ -1.01
CTNND1-201ENST00000358694 HTR3EA5X5Y0 456 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 PLD2O14939 933 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 MT-CYBP00156 380 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-201ENST00000358694 PDYNP01213 254 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 SERPINA6P08185 405 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 OR4Q2P0C623 313 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 NPR2P20594 1047 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 HSPA7P48741 367 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 DCDC1P59894 354 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 SPAG16Q8N0X2 631 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 SLC44A3Q8N4M1 653 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 JAGN1Q8N5M9 183 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 ARL10Q8N8L6 244 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 SHDQ96IW2 340 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 NCDNQ9UBB6 729 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 SMAD9O15198 467 aaKnown RBP8.74□□□□□ -1.01
CTNND1-201ENST00000358694 ORC5O43913 435 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 ELNP15502 786 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 MRPL49Q13405 166 aaKnown RBP8.74□□□□□ -1.01
CTNND1-201ENST00000358694 GTF2H2Q13888 395 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 ARHGAP40Q5TG30 622 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 GTF2H2CQ6P1K8 395 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 FAM47BQ8NA70 645 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 OR7D4Q8NG98 312 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 UPF1Q92900 1129 aaKnown RBP eCLIP8.74□□□□□ -1.016e-7■■□□□ 14.4
CTNND1-201ENST00000358694 TOR3AQ9H497 397 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 NUDT4Q9NZJ9 180 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 HIF3AQ9Y2N7 669 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 TIMM22Q9Y584 194 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 SPIN1Q9Y657 262 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-201ENST00000358694 DNMT3AQ9Y6K1 912 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-201ENST00000358694 FRMPD4Q14CM0 1322 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 SCDO00767 359 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 ADAMDEC1O15204 470 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 RPP14O95059 124 aaKnown RBP8.74□□□□□ -1.01
CTNND1-201ENST00000358694 TNFP01375 233 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 IFNA2P01563 188 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 BCKDHAP12694 445 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 ATF4P18848 351 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-201ENST00000358694 GLRA2P23416 452 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 PAX7P23759 505 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 TIE1P35590 1138 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 PLP2Q04941 152 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 TARDBPQ13148 414 aaKnown RBP eCLIP8.74□□□□□ -1.011e-8■■■■□ 21.9
CTNND1-201ENST00000358694 CA9Q16790 459 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 C2orf27AQ580R0 203 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 AADACL2Q6P093 401 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 SYCE2Q6PIF2 218 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 OTUB2Q96DC9 234 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 GPR21Q99679 349 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 CTPS2Q9NRF8 586 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 CLDND1Q9NY35 253 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 ZNF69Q9UC07 566 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 CYTH4Q9UIA0 394 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 FADS3Q9Y5Q0 445 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 ZFP37Q9Y6Q3 630 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-201ENST00000358694 IQSEC2Q5JU85 1478 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 C13orf42A0A1B0GVH6 325 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 C5orf60A6NFR6 353 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 YDJCA8MPS7 323 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 TISP43B9A030 160 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 GADD45GO95257 159 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 HRGP04196 525 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 EDNRAP25101 427 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 CSTF1Q05048 431 aaKnown RBP8.74□□□□□ -1.01
CTNND1-201ENST00000358694 LRRC32Q14392 662 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 IL23RQ5VWK5 629 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 ANKRD26P1Q6NSI1 321 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 ALYREFQ86V81 257 aaKnown RBP8.74□□□□□ -1.01
CTNND1-201ENST00000358694 BOLLQ8N9W6 283 aaKnown RBP8.74□□□□□ -1.01
CTNND1-201ENST00000358694 ATAD1Q8NBU5 361 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 NECAB3Q96P71 396 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-201ENST00000358694 PSKH2Q96QS6 385 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 ALG2Q9H553 416 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 GLOD4Q9HC38 313 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 PAK6Q9NQU5 681 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-201ENST00000358694 PNPOQ9NVS9 261 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 VNN3Q9NY84 501 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 CARD8Q9Y2G2 431 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 FCF1Q9Y324 198 aaKnown RBP8.74□□□□□ -1.01
CTNND1-201ENST00000358694 SALL1Q9NSC2 1324 aa8.74□□□□□ -1.01
CTNND1-201ENST00000358694 hCG_2039718K7EN88 272 aa8.73□□□□□ -1.01
CTNND1-201ENST00000358694 CTDNEP1O95476 244 aa8.73□□□□□ -1.01
CTNND1-201ENST00000358694 CCNE2O96020 404 aa8.73□□□□□ -1.01
CTNND1-201ENST00000358694 IRF2P14316 349 aa8.73□□□□□ -1.01
CTNND1-201ENST00000358694 ZNF3P17036 446 aa8.73□□□□□ -1.01
CTNND1-201ENST00000358694 TACR2P21452 398 aa8.73□□□□□ -1.01
CTNND1-201ENST00000358694 ACSL1P33121 698 aa8.73□□□□□ -1.01
CTNND1-201ENST00000358694 TNFSF9P41273 254 aa8.73□□□□□ -1.01
CTNND1-201ENST00000358694 ZNF41P51814 821 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-201ENST00000358694 AFF1P51825 1210 aaKnown RBP8.73□□□□□ -1.01
CTNND1-201ENST00000358694 CLCA4Q14CN2 919 aa8.73□□□□□ -1.01
CTNND1-201ENST00000358694 LDLRAP1Q5SW96 308 aa8.73□□□□□ -1.01
CTNND1-201ENST00000358694 GDF6Q6KF10 455 aaPredicted RBP8.73□□□□□ -1.01
CTNND1-201ENST00000358694 YIPF7Q8N8F6 280 aa8.73□□□□□ -1.01
CTNND1-201ENST00000358694 C12orf29Q8N999 325 aa8.73□□□□□ -1.01
CTNND1-201ENST00000358694 GORASP1Q9BQQ3 440 aa8.73□□□□□ -1.01
CTNND1-201ENST00000358694 TTYH2Q9BSA4 534 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms