RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 ZNF3P17036 446 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 RPL38P63173 70 aaKnown RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 SREBF2Q12772 1141 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ZC3H3Q8IXZ2 948 aaKnown RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 DBNDD1Q9H9R9 158 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ZNF462Q96JM2 2506 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 NUDT19A8MXV4 375 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 OR6A2O95222 327 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 MT-ND2P03891 347 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 RETP07949 1114 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 RHOQP17081 205 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ADH6P28332 368 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 WNT3AP56704 352 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ZNF234Q14588 700 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ATG9BQ674R7 924 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 DPY19L3Q6ZPD9 716 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 SOCS4Q8WXH5 440 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 PBDC1Q9BVG4 233 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 TLR6Q9Y2C9 796 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 MRC1P22897 1456 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 MCIDASD6RGH6 385 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ACTC1P68032 377 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ACTA1P68133 377 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 COL28A1Q2UY09 1125 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ZNF730Q6ZMV8 503 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 YAF2Q8IY57 180 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 MS4A15Q8N5U1 240 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ZYG11BQ9C0D3 744 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 MAGEH1Q9H213 219 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 THG1LQ9NWX6 298 aaKnown RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 FBXO9Q9UK97 447 aaPredicted RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 HTR3EA5X5Y0 456 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 H0YGN5 161 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ACSL4O60488 711 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 EEDO75530 441 aaKnown RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 SELPLGQ14242 412 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 MINDY1Q8N5J2 469 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 THAP6Q8TBB0 222 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 MOAP1Q96BY2 351 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 CENPOQ9BU64 300 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 EFCAB11Q9BUY7 163 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 TTLL2Q9BWV7 592 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 TMEM184CQ9NVA4 438 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 QPCTLQ9NXS2 382 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 TCAF1Q9Y4C2 921 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 ASB3Q9Y575 518 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 NFS1Q9Y697 457 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 SYNDIG1LA6NDD5 238 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 NR2F1P10589 423 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 UQCRC1P31930 480 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 HNRNPDQ14103 355 aaKnown RBP6.47□□□□□ -1.37
VPS13B-202ENST00000357162 AP5B1Q2VPB7 878 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 GALNT12Q8IXK2 581 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 OR56A1Q8NGH5 318 aa6.47□□□□□ -1.37
VPS13B-202ENST00000357162 XRN1Q8IZH2 1706 aaKnown RBP6.46□□□□□ -1.37
VPS13B-202ENST00000357162 OR2AT4A6NND4 320 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 FAM86B1E9PN63 330 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 MSCO60682 206 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 FAM86B2P0C5J1 330 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 TAF13Q15543 124 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 CYP20A1Q6UW02 462 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 ASB18Q6ZVZ8 466 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 SLC2A14Q8TDB8 520 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 TWIST2Q8WVJ9 160 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 MAFIPQ8WZ33 124 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 LRRC58Q96CX6 371 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 NDC1Q9BTX1 674 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 DNMT3LQ9UJW3 386 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 E5RJQ4 531 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 LRRN3E7EW58 273 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 PPM1AP35813 382 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 TRIM23P36406 574 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 RPL4P36578 427 aaKnown RBP6.46□□□□□ -1.37
VPS13B-202ENST00000357162 THOP1P52888 689 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 ARPP19P56211 112 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 IKBKEQ14164 716 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 SLC35F1Q5T1Q4 408 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 ELMOD2Q8IZ81 293 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 ZNF382Q96SR6 550 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 LRRN3Q9H3W5 708 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 PCDHB3Q9Y5E6 796 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 FER1L4A9Z1Z3 1794 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 CCNYL3P0C7X3 344 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 TAS2R31P59538 309 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 GARNL3Q5VVW2 1013 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 VGLL2Q8N8G2 317 aa6.46□□□□□ -1.37
VPS13B-202ENST00000357162 SEMA4BQ9NPR2 832 aaPredicted RBP6.46□□□□□ -1.37
VPS13B-202ENST00000357162 KRBOX1C9JBD0 128 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 HRH2P25021 359 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 SLC1A5Q15758 541 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 MED30Q96HR3 178 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 GATA5Q9BWX5 397 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 ABHD16BQ9H3Z7 469 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 TSR3Q9UJK0 312 aaKnown RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 OAS3Q9Y6K5 1087 aaKnown RBP6.46□□□□□ -1.38
VPS13B-202ENST00000357162 CXCR6O00574 342 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 PTBP1P26599 531 aaKnown RBP eCLIP6.46□□□□□ -1.381e-6■■■■■ 36.5
VPS13B-202ENST00000357162 DGKGP49619 791 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 ETV1P50549 477 aa6.46□□□□□ -1.38
VPS13B-202ENST00000357162 SETMARQ53H47 684 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms