RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 CASC3O15234 703 aaKnown RBP13.57□□□□□ -0.24
SEC13-202ENST00000350697 UBXN7O94888 489 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 MT-CO3P00414 261 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 ADRB1P08588 477 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 ABHD2P08910 425 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 JUPP14923 745 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 SPRP35270 261 aaPredicted RBP13.57□□□□□ -0.24
SEC13-202ENST00000350697 MAPK9P45984 424 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 PPM1FP49593 454 aaPredicted RBP13.57□□□□□ -0.24
SEC13-202ENST00000350697 VSNL1P62760 191 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 FOXC1Q12948 553 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 PDAP1Q13442 181 aaKnown RBP13.57□□□□□ -0.24
SEC13-202ENST00000350697 EFTUD2Q15029 972 aaKnown RBP eCLIP13.57□□□□□ -0.249e-9■■■■□ 23.5
SEC13-202ENST00000350697 KLHL38Q2WGJ6 581 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 NKAIN2Q5VXU1 208 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 LRRC8EQ6NSJ5 796 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 KLHL35Q6PF15 583 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 USP53Q70EK8 1073 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 PIM3Q86V86 326 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 OR5AR1Q8NGP9 310 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 CFAP61Q8NHU2 1237 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 DPYSL5Q9BPU6 564 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 HGH1Q9BTY7 390 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 ATXN7L1Q9ULK2 861 aaPredicted RBP13.57□□□□□ -0.24
SEC13-202ENST00000350697 CLCA2Q9UQC9 943 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 NCOR2Q9Y618 2525 aa13.57□□□□□ -0.24
SEC13-202ENST00000350697 RIPK2O43353 540 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 ATP8B1O43520 1251 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 HYAL3O43820 417 aaPredicted RBP13.56□□□□□ -0.24
SEC13-202ENST00000350697 KDM1AO60341 852 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 MATN4O95460 622 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 PROS1P07225 676 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 MPC1LP0DKB6 136 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 AMD1P17707 334 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 RGS4P49798 205 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 LIMK2P53671 638 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 SLC12A2P55011 1212 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 CLDN6P56747 220 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 POU4F1Q01851 419 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 PRKG2Q13237 762 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 FBXO38Q6PIJ6 1188 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 WDR74Q6RFH5 385 aaPredicted RBP13.56□□□□□ -0.24
SEC13-202ENST00000350697 PAQR3Q6TCH7 311 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 DCUN1D3Q8IWE4 304 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 CPNE9Q8IYJ1 553 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 DCBLD1Q8N8Z6 715 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 OR52E1Q8NGJ3 308 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 LCN9Q8WX39 176 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 DEPDC7Q96QD5 511 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 GPR22Q99680 433 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 OLFM1Q99784 485 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 ZMYND15Q9H091 742 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 TFB2MQ9H5Q4 396 aaKnown RBP13.56□□□□□ -0.24
SEC13-202ENST00000350697 RDH14Q9HBH5 336 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 TSR3Q9UJK0 312 aaKnown RBP13.56□□□□□ -0.24
SEC13-202ENST00000350697 MTO1Q9Y2Z2 717 aaKnown RBP13.56□□□□□ -0.24
SEC13-202ENST00000350697 NFS1Q9Y697 457 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 COL27A1Q8IZC6 1860 aaPredicted RBP13.56□□□□□ -0.24
SEC13-202ENST00000350697 FAM221BA6H8Z2 402 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 FAM155BO75949 473 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 TYRP1P17643 537 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 SAT1P21673 171 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 CCNFP41002 786 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 CAPZBP47756 277 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 TAS2R39P59534 338 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 ISXQ2M1V0 245 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 TTC23LQ6PF05 361 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 MAGEC3Q8TD91 643 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 EEF1AKMT1Q8WVE0 214 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 JPH3Q8WXH2 748 aaPredicted RBP13.56□□□□□ -0.24
SEC13-202ENST00000350697 NCSTNQ92542 709 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 RSC1A1Q92681 617 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 GRAMD1AQ96CP6 724 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 TSPAN17Q96FV3 270 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 TMEM74Q96NL1 305 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 NUDT22Q9BRQ3 303 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 POPDC3Q9HBV1 291 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 OGFRQ9NZT2 677 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 SLC39A10Q9ULF5 831 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 WASF3Q9UPY6 502 aa13.56□□□□□ -0.24
SEC13-202ENST00000350697 RUVBL2Q9Y230 463 aaKnown RBP13.56□□□□□ -0.24
SEC13-202ENST00000350697 TDRKHQ9Y2W6 561 aaKnown RBP13.56□□□□□ -0.24
SEC13-202ENST00000350697 TMX2-CTNND1H3BSU7 103 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 CSO75390 466 aaKnown RBP13.55□□□□□ -0.24
SEC13-202ENST00000350697 PSIP1O75475 530 aaKnown RBP13.55□□□□□ -0.24
SEC13-202ENST00000350697 C1orf105O95561 183 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 INHBAP08476 426 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 ITGA2BP08514 1039 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 CSF2RBP32927 897 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 PDX1P52945 283 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 IL2P60568 153 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 CFHR1Q03591 330 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 TARDBPQ13148 414 aaKnown RBP eCLIP13.55□□□□□ -0.241e-7■■□□□ 14.1
SEC13-202ENST00000350697 USP10Q14694 798 aaKnown RBP13.55□□□□□ -0.24
SEC13-202ENST00000350697 UAP1Q16222 522 aaPredicted RBP13.55□□□□□ -0.24
SEC13-202ENST00000350697 TMEM71Q6P5X7 295 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 CYHR1Q6ZMK1 362 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 PIWIL4Q7Z3Z4 852 aaKnown RBP13.55□□□□□ -0.24
SEC13-202ENST00000350697 TMPRSS9Q7Z410 1059 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 OOSP2Q86WS3 158 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms