RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 METTL6Q8TCB7 284 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 ASZ1Q8WWH4 475 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 GLMNQ92990 594 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 USP7Q93009 1102 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 STMN2Q93045 179 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 RAB7BQ96AH8 199 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 ROPN1LQ96C74 230 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 FBXL8Q96CD0 374 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 AP2M1Q96CW1 435 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 PPP1R16AQ96I34 528 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 CDK15Q96Q40 435 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 EGFL8Q99944 293 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 APOL5Q9BWW9 433 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 TRIM54Q9BYV2 358 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 SLC32A1Q9H598 525 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 IGFLR1Q9H665 355 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 SLC28A3Q9HAS3 691 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 MRPL40Q9NQ50 206 aaKnown RBP6.77□□□□□ -1.33
TRIM55-203ENST00000350034 ASIC5Q9NY37 505 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 ZIM2Q9NZV7 527 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 CCDC167Q9P0B6 97 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 CLEC1BQ9P126 229 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 TMEM181Q9P2C4 612 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 CD300AQ9UGN4 299 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 TSR3Q9UJK0 312 aaKnown RBP6.77□□□□□ -1.33
TRIM55-203ENST00000350034 ANGPTL2Q9UKU9 493 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 NDUFAF1Q9Y375 327 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 PLXNB3Q9ULL4 1909 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 PLXNA2O75051 1894 aa6.77□□□□□ -1.33
TRIM55-203ENST00000350034 A0A1W2PP18 115 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 FAM234BA2RU67 622 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 TBC1D3BA6NDS4 549 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 ANTXRLA6NF34 631 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 GRXCR2A6NFK2 248 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 TMEM202A6NGA9 273 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 ARHGEF33A8MVX0 844 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 LOC730098B7Z3J9 87 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 E7ENX8 843 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 C1QTNF3-AMACRE9PGA6 284 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 H3BNX3 289 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 FXYD1O00168 92 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 SLC28A1O00337 649 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 MANBAO00462 879 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 TSPAN6O43657 245 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 PRAMEF4O60810 478 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 ATG13O75143 517 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 KATNA1O75449 491 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 C7P10643 843 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 LAMP2P13473 410 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 C6P13671 934 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 EPB42P16452 691 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 XRCC1P18887 633 aaPredicted RBP6.76□□□□□ -1.33
TRIM55-203ENST00000350034 CYP2A7P20853 494 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 ME2P23368 584 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 IL12AP29459 219 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 VHLP40337 213 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 MAPK9P45984 424 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 AP2B1P63010 937 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 MS4A2Q01362 244 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 FOXM1Q08050 763 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 TMEM115Q12893 351 aaPredicted RBP6.76□□□□□ -1.33
TRIM55-203ENST00000350034 TRAP1Q12931 704 aaKnown RBP6.76□□□□□ -1.33
TRIM55-203ENST00000350034 CAMK2GQ13555 558 aaPredicted RBP6.76□□□□□ -1.33
TRIM55-203ENST00000350034 RCAN2Q14206 197 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 GRM2Q14416 872 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 ABRAXAS2Q15018 415 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 TLR1Q15399 786 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 KIF19Q2TAC6 998 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 SPATS1Q496A3 300 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 ATP6AP1LQ52LC2 224 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 C2orf27AQ580R0 203 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 PIP5KL1Q5T9C9 394 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 PRAMEF9Q5VWM5 478 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 EGFLAMQ63HQ2 1017 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 NEK5Q6P3R8 708 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 FBXL19Q6PCT2 694 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 IL27RAQ6UWB1 636 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 SCIMPQ6UWF3 145 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 PARM1Q6UWI2 310 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 MBOAT1Q6ZNC8 495 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 LRRC74BQ6ZQY2 392 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 DSG4Q86SJ6 1040 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 SLC22A15Q8IZD6 547 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 MINDY1Q8N5J2 469 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 DCBLD1Q8N8Z6 715 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 SNX31Q8N9S9 440 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 PCYOX1LQ8NBM8 494 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 FBXO15Q8NCQ5 510 aaPredicted RBP6.76□□□□□ -1.33
TRIM55-203ENST00000350034 ST13P5Q8NFI4 369 aaPredicted RBP6.76□□□□□ -1.33
TRIM55-203ENST00000350034 MCOLN3Q8TDD5 553 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 KCNV2Q8TDN2 545 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 SUSD6Q92537 303 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 ELMO1Q92556 727 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 NUS1Q96E22 293 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 DUS3LQ96G46 650 aaKnown RBP6.76□□□□□ -1.33
TRIM55-203ENST00000350034 LINC00615Q96LM1 132 aaPredicted RBP6.76□□□□□ -1.33
TRIM55-203ENST00000350034 PPP3R2Q96LZ3 170 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 P2RY13Q9BPV8 354 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 HOPXQ9BPY8 73 aaPredicted RBP6.76□□□□□ -1.33
TRIM55-203ENST00000350034 CCM2Q9BSQ5 444 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms