RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 GPM6BQ13491 265 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 LDLRAP1Q5SW96 308 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 RBM23Q86U06 439 aaKnown RBP16.33■□□□□ 0.21
SAMM50-201ENST00000350028 NRSN1Q8IZ57 195 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 DPP10Q8N608 796 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 MCOLN3Q8TDD5 553 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 BTN2A2Q8WVV5 523 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 ASZ1Q8WWH4 475 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 ELMO1Q92556 727 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 USP7Q93009 1102 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 VPS35Q96QK1 796 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 UHRF1Q96T88 793 aaPredicted RBP16.33■□□□□ 0.21
SAMM50-201ENST00000350028 MTG2Q9H4K7 406 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 ASIC5Q9NY37 505 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 ACTR3BQ9P1U1 418 aa16.33■□□□□ 0.21
SAMM50-201ENST00000350028 MBD1Q9UIS9 605 aaPredicted RBP16.33■□□□□ 0.21
SAMM50-201ENST00000350028 CNOT11Q9UKZ1 510 aaKnown RBP16.33■□□□□ 0.21
SAMM50-201ENST00000350028 ZNF490Q9ULM2 529 aaPredicted RBP16.33■□□□□ 0.21
SAMM50-201ENST00000350028 EIF4E1BA6NMX2 242 aaKnown RBP16.33■□□□□ 0.2
SAMM50-201ENST00000350028 PSMD11O00231 422 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 FFAR3O14843 346 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 GPR42O15529 346 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 SGTAO43765 313 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 TULP3O75386 442 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 NFATC1O95644 943 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 MYOGP15173 224 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 JAK1P23458 1154 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 MMP12P39900 470 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 GNPDA1P46926 289 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 BOP1Q14137 746 aaKnown RBP16.33■□□□□ 0.2
SAMM50-201ENST00000350028 TIGD2Q4W5G0 525 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 RFTN2Q52LD8 501 aaPredicted RBP16.33■□□□□ 0.2
SAMM50-201ENST00000350028 LCN8Q6JVE9 175 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 SERPINA13PQ6UXR4 307 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 CYP2R1Q6VVX0 501 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 LIPIQ6XZB0 460 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 MBOAT1Q6ZNC8 495 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 RASGRP3Q8IV61 690 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 BPIFB1Q8TDL5 484 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 SKA2Q8WVK7 121 aaPredicted RBP16.33■□□□□ 0.2
SAMM50-201ENST00000350028 RSPRY1Q96DX4 576 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 SLC45A3Q96JT2 553 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 MYCBPQ99417 103 aaPredicted RBP16.33■□□□□ 0.2
SAMM50-201ENST00000350028 ZBTB18Q99592 522 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 FAM83CQ9BQN1 747 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 Q9H521 79 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 ACTR8Q9H981 624 aa16.33■□□□□ 0.2
SAMM50-201ENST00000350028 POLR3HQ9Y535 204 aaPredicted RBP16.33■□□□□ 0.2
SAMM50-201ENST00000350028 CDH23Q9H251 3354 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 ANKRD28O15084 1053 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 MTX2O75431 263 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 PAPLNO95428 1278 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 PRNPP04156 253 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 SLC6A12P48065 614 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 HSPA13P48723 471 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 INPP5AQ14642 412 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 IMPG1Q17R60 797 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 GGTA1PQ4G0N0 100 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 TCEAL5Q5H9L2 206 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 C12orf40Q86WS4 652 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 VRK3Q8IV63 474 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 ETFBKMTQ8IXQ9 262 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 SLCO4A1Q96BD0 722 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 MAGEB10Q96LZ2 347 aaPredicted RBP16.32■□□□□ 0.2
SAMM50-201ENST00000350028 HBEGFQ99075 208 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 ACTL8Q9H568 366 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 LRTM1Q9HBL6 345 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 ARMC1Q9NVT9 282 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 DLGAP2Q9P1A6 1054 aa16.32■□□□□ 0.2
SAMM50-201ENST00000350028 GMPR2Q9P2T1 348 aaKnown RBP16.32■□□□□ 0.2
SAMM50-201ENST00000350028 FADS2P1A8MWK0 482 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 DENRO43583 198 aaKnown RBP16.31■□□□□ 0.2
SAMM50-201ENST00000350028 SLCO2B1O94956 709 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 LYNP07948 512 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 ELFN1P0C7U0 828 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 PCSK2P16519 638 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 ATP6V1B2P21281 511 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 VIPR2P41587 438 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 RPL38P63173 70 aaKnown RBP16.31■□□□□ 0.2
SAMM50-201ENST00000350028 CREB5Q02930 508 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 FOLH1Q04609 750 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 CACHD1Q5VU97 1274 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 PARS2Q7L3T8 475 aaKnown RBP16.31■□□□□ 0.2
SAMM50-201ENST00000350028 HID1Q8IV36 788 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 GLB1L3Q8NCI6 653 aaPredicted RBP16.31■□□□□ 0.2
SAMM50-201ENST00000350028 DNAJB14Q8TBM8 379 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 PIP4K2CQ8TBX8 421 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 GLYATL1Q969I3 302 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 RAB26Q9ULW5 256 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 SNX6Q9UNH7 406 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 H0YJX3 145 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 WNT9AO14904 365 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 UBTFL6P0CB48 400 aaPredicted RBP16.31■□□□□ 0.2
SAMM50-201ENST00000350028 EPORP19235 508 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 VARSP26640 1264 aaKnown RBP16.31■□□□□ 0.2
SAMM50-201ENST00000350028 GRIA3P42263 894 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 GSK3BP49841 420 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 LIPEQ05469 1076 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 KCNC3Q14003 757 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 ACOX1Q15067 660 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms