RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 AQP6Q13520 282 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 ATP1A4Q13733 1029 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 CBX2Q14781 532 aaPredicted RBP17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 ADGRG2Q8IZP9 1017 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 NCLNQ969V3 563 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 CLPBQ9H078 707 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 ASB8Q9H765 288 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 PAK1IP1Q9NWT1 392 aaPredicted RBP17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 ZNF510Q9Y2H8 683 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 UPK3BL1B0FP48 263 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 UPK3BL2E5RIL1 263 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 CXCR6O00574 342 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 ABCB7O75027 752 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 S100BP04271 92 aaPredicted RBP17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 NEK2P51955 445 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 RHOAP61586 193 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 SPCS2Q15005 226 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 PON2Q15165 354 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 CPSF6Q16630 551 aaKnown RBP eCLIP17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 C16orf87Q6PH81 154 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 BTLAQ7Z6A9 289 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 ADAMTSL2Q86TH1 951 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 PARP8Q8N3A8 854 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 LEMD2Q8NC56 503 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 OR8J3Q8NGG0 315 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 CASD1Q96PB1 797 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 OR52E6Q96RD3 313 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 INPP5KQ9BT40 448 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 GORASP2Q9H8Y8 452 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 TBC1D23Q9NUY8 699 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 DNAJB9Q9UBS3 223 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 PCDHB14Q9Y5E9 798 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 TNPO3Q9Y5L0 923 aaKnown RBP17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 PDE4DIPQ5VU43 2346 aa17.73■□□□□ 0.43
PTP4A3-202ENST00000349124 A0A1B0GVM2 712 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 ELOVL7A1L3X0 281 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 H7C0S8 307 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 RAD51BO15315 384 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 SMAD6O43541 496 aaKnown RBP17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 XPNPEP2O43895 674 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 INMTO95050 263 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 CLDN7O95471 211 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 OR1D2P34982 312 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 ACLYP53396 1101 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 PPP2R2BQ00005 443 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 HECTD3Q5T447 861 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 ADGRF1Q5T601 910 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 GALNT5Q7Z7M9 940 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 BORCS5Q969J3 196 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 UGT2B28Q9BY64 529 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 IL26Q9NPH9 171 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 WWOXQ9NZC7 414 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 ANKRD36A6QL64 1941 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 ULK1O75385 1050 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 BCL10O95999 233 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 RPLP2P05387 115 aaKnown RBP17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 CD9P21926 228 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 AKT1P31749 480 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 HMGCLP35914 325 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 SPIDRQ14159 915 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 GALNT10Q86SR1 603 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 PAF1Q8N7H5 531 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 FBXO22Q8NEZ5 403 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 DBF4BQ8NFT6 615 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 PDLIM5Q96HC4 596 aaKnown RBP17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 PPP3R2Q96LZ3 170 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 CCDC90BQ9GZT6 254 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 VNN3Q9NY84 501 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 EIF3LQ9Y262 564 aaKnown RBP17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 DLGAP4Q9Y2H0 992 aa17.72■□□□□ 0.43
PTP4A3-202ENST00000349124 TMEM88BA6NKF7 163 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 TBL1XO60907 577 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 NOL3O60936 208 aaKnown RBP17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 SEC24AO95486 1093 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 DET1Q7L5Y6 550 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 CNIH3Q8TBE1 160 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 ZBTB18Q99592 522 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 TUBA1CQ9BQE3 449 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 FUNDC2Q9BWH2 189 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 OPTCQ9UBM4 332 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 PDE10AQ9Y233 779 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 FZD6O60353 706 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 SERPINA1P01009 418 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 FUCA1P04066 466 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 JUNBP17275 347 aaPredicted RBP17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 TACR1P25103 407 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 HTR1BP28222 390 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 DCTP40126 519 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 GNPDA1P46926 289 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 TMBIM6P55061 237 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 ARHGEF7Q14155 803 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 RUNDC3AQ59EK9 446 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 DCDC5Q6ZRR9 648 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 PIH1D2Q8WWB5 315 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 SDCCAG3Q96C92 435 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 SLC22A12Q96S37 553 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 CD244Q9BZW8 370 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 LRTM1Q9HBL6 345 aa17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 AFF4Q9UHB7 1163 aaKnown RBP17.71■□□□□ 0.43
PTP4A3-202ENST00000349124 PSME2Q9UL46 239 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms