RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 GMEB2Q9UKD1 530 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 IKZF3Q9UKT9 509 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 OR6C75A6NL08 312 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 L7N2F9 121 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 ERAL1O75616 437 aaKnown RBP10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 LCN1P31025 176 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 CSTF1Q05048 431 aaKnown RBP10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 ESCO2Q56NI9 601 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 ETFRF1Q6IPR1 90 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 ARCQ7LC44 396 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 CMC1Q7Z7K0 106 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 UBE2J2Q8N2K1 259 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 LSMEM1Q8N8F7 131 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 TEX19Q8NA77 164 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 OR8D1Q8WZ84 308 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 SNAPC3Q92966 411 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 MRPL48Q96GC5 212 aaKnown RBP10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 MYO19Q96H55 970 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 SLC39A13Q96H72 371 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 TNKS2Q9H2K2 1166 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 EBF1Q9UH73 591 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 CD84Q9UIB8 345 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 DLGAP4Q9Y2H0 992 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 SNX10Q9Y5X0 201 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 NPEPPSL1A6NEC2 478 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 FABP12A6NFH5 140 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 G3V2T6 193 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 SLC30A4O14863 429 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 ADH1CP00326 375 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 UBL4AP11441 157 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 AFF1P51825 1210 aaKnown RBP10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 SEC13P55735 322 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 FGL1Q08830 312 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 TUBB3Q13509 450 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 SNAPC1Q16533 368 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 FAM187BQ17R55 369 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 RNF151Q2KHN1 245 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 XYLT1Q86Y38 959 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 C10orf82Q8WW14 230 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 ST8SIA2Q92186 375 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 RERGQ96A58 199 aaPredicted RBP10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 BORCS6Q96GS4 357 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 EBNA1BP2Q99848 306 aaKnown RBP10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 HTATIP2Q9BUP3 242 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 EXO5Q9H790 373 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 IFT46Q9NQC8 304 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 TAS2R3Q9NYW6 316 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 CACNG4Q9UBN1 327 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 STBD1O95210 358 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 DNTTP04053 509 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 RAB3AP20336 220 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 ATP5F1P24539 256 aaPredicted RBP10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 GSTM5P46439 218 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 RPS9P46781 194 aaKnown RBP10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 PSMD8P48556 350 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 SF3B4Q15427 424 aaKnown RBP eCLIP10.92□□□□□ -0.665e-11■■□□□ 13.3
SMARCE1-202ENST00000348513 ALKBH2Q6NS38 261 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 NATD1Q8N6N6 113 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 ZSCAN1Q8NBB4 408 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 NKX2-3Q8TAU0 364 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 ZNF671Q8TAW3 534 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 PEX13Q92968 403 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 METTL2AQ96IZ6 378 aaKnown RBP10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 TEKT5Q96M29 485 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 KCTD15Q96SI1 283 aaPredicted RBP10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 CHIAQ9BZP6 476 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 AGO3Q9H9G7 860 aaKnown RBP10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 SLC28A3Q9HAS3 691 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 ABCB9Q9NP78 766 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 CD320Q9NPF0 282 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 SNX15Q9NRS6 342 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 CLN6Q9NWW5 311 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 ADGRB2O60241 1585 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 WWP2O00308 870 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 RB1P06400 928 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 ANXA6P08133 673 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 SLC35G4P0C7Q5 338 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 RAB4AP20338 218 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 MMP8P22894 467 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 MYL9P24844 172 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 HTR1BP28222 390 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 NUDT1P36639 197 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 MAPK8P45983 427 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 CDH15P55291 814 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 ARF3P61204 181 aaPredicted RBP10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 ARF1P84077 181 aaKnown RBP10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 HYIQ5T013 277 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 BBS12Q6ZW61 710 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 ADGRD2Q7Z7M1 963 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 TMEM126BQ8IUX1 230 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 CHERPQ8IWX8 916 aaKnown RBP10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 CFAP206Q8IYR0 622 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 OR5T3Q8NGG3 340 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 RCN3Q96D15 328 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 CAPNS2Q96L46 248 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 TMEM109Q9BVC6 243 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 KIAA1522Q9P206 1035 aaPredicted RBP10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 OR10H1Q9Y4A9 318 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 E9PI62 339 aa10.92□□□□□ -0.66
SMARCE1-202ENST00000348513 SPARCP09486 303 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms