RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 MCOLN3Q8TDD5 553 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 IPCEF1Q8WWN9 437 aaPredicted RBP15.59■□□□□ 0.09
HMGA1-202ENST00000347617 OVCA2Q8WZ82 227 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 FCGR1BQ92637 280 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 SLC47A1Q96FL8 570 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 CDK5RAP1Q96SZ6 601 aaKnown RBP15.59■□□□□ 0.09
HMGA1-202ENST00000347617 DERL2Q9GZP9 239 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 CCDC90BQ9GZT6 254 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 RC3H2Q9HBD1 1191 aaKnown RBP15.59■□□□□ 0.09
HMGA1-202ENST00000347617 INTS7Q9NVH2 962 aaKnown RBP15.59■□□□□ 0.09
HMGA1-202ENST00000347617 GIMAP2Q9UG22 337 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 POU2F3Q9UKI9 436 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 BTRCQ9Y297 605 aa15.59■□□□□ 0.09
HMGA1-202ENST00000347617 NYNRINQ9P2P1 1898 aaKnown RBP15.59■□□□□ 0.09
HMGA1-202ENST00000347617 NT5C1B-RDH14C9J2C7 533 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 BCKDKO14874 412 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 VNN2O95498 520 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 ANGPTL1O95841 491 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 SOD2P04179 222 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 ZDHHC11BP0C7U3 371 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 CHRNA4P43681 627 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 CSNK2BP67870 215 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 ZNF45Q02386 682 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 MANEALQ5VSG8 457 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 AFMIDQ63HM1 303 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 LAIR2Q6ISS4 152 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 DLEU7Q6UYE1 221 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 TAS1R1Q7RTX1 841 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 DSG4Q86SJ6 1040 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 TMEM173Q86WV6 379 aaPredicted RBP15.58■□□□□ 0.08
HMGA1-202ENST00000347617 DCP2Q8IU60 420 aaKnown RBP15.58■□□□□ 0.08
HMGA1-202ENST00000347617 LYSMD2Q8IV50 215 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 DNAJC5GQ8N7S2 189 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 OR56A4Q8NGH8 313 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 LILRB4Q8NHJ6 448 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 NDNFQ8TB73 568 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 BCL7CQ8WUZ0 217 aaPredicted RBP15.58■□□□□ 0.08
HMGA1-202ENST00000347617 ATL1Q8WXF7 558 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 IMP4Q96G21 291 aaKnown RBP15.58■□□□□ 0.08
HMGA1-202ENST00000347617 PAWRQ96IZ0 340 aaKnown RBP15.58■□□□□ 0.08
HMGA1-202ENST00000347617 ZNF558Q96NG5 402 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 SLIRPQ9GZT3 109 aaKnown RBP15.58■□□□□ 0.08
HMGA1-202ENST00000347617 GABARAPL1Q9H0R8 117 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 PTGDR2Q9Y5Y4 395 aa15.58■□□□□ 0.08
HMGA1-202ENST00000347617 WASH4PA8MWX3 477 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 KLK8O60259 260 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 RETP07949 1114 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 LAG3P18627 525 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 MLLT6P55198 1093 aaPredicted RBP15.57■□□□□ 0.08
HMGA1-202ENST00000347617 YBX1P67809 324 aaKnown RBP15.57■□□□□ 0.08
HMGA1-202ENST00000347617 SF3B4Q15427 424 aaKnown RBP eCLIP15.57■□□□□ 0.083e-7■■□□□ 12.6
HMGA1-202ENST00000347617 LRRC26Q2I0M4 334 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 LRIT3Q3SXY7 679 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 ATP6AP1LQ52LC2 224 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 ARL10Q8N8L6 244 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 OR6P1Q8NGX9 317 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 DNAJB8Q8NHS0 232 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 MCFD2Q8NI22 146 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 EXT2Q93063 718 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 BTBD2Q9BX70 525 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 ACTR8Q9H981 624 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 SMURF2Q9HAU4 748 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 HCSTQ9UBK5 93 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 AFF4Q9UHB7 1163 aaKnown RBP15.57■□□□□ 0.08
HMGA1-202ENST00000347617 NEU3Q9UQ49 428 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 NOX1Q9Y5S8 564 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 PMF1-BGLAPU3KQ54 211 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 C9JVG2 144 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 TOR1BO14657 336 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 ABLIM3O94929 683 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 SIX3O95343 332 aaPredicted RBP15.57■□□□□ 0.08
HMGA1-202ENST00000347617 GLP2RO95838 553 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 CASP2P42575 452 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 RENBPP51606 427 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 DEFA1P59665 94 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 DEFA3P59666 94 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 ARPC4P59998 168 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 SLC35A2P78381 396 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 RING1Q06587 406 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 CLCA4Q14CN2 919 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 OR4D1Q15615 310 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 NPTX1Q15818 432 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 SMU1Q2TAY7 513 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 PNCKQ6P2M8 343 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 RBM23Q86U06 439 aaKnown RBP15.57■□□□□ 0.08
HMGA1-202ENST00000347617 HEATR4Q86WZ0 1026 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 SLC39A11Q8N1S5 342 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 OR2T12Q8NG77 320 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 OR52K2Q8NGK3 314 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 PROKR1Q8TCW9 393 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 SGCDQ92629 289 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 FBXO32Q969P5 355 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 KCNA7Q96RP8 456 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 APOL4Q9BPW4 351 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 SLC39A8Q9C0K1 460 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 NDEL1Q9GZM8 345 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 RETREG1Q9H6L5 497 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 TM9SF3Q9HD45 589 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.57■□□□□ 0.08
HMGA1-202ENST00000347617 RNF112Q9ULX5 631 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms