RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 FBXO15Q8NCQ5 510 aaPredicted RBP10.71□□□□□ -0.69
CLCN6-202ENST00000346436 STYXQ8WUJ0 223 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 SLC35F5Q8WV83 523 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 DGCR14Q96DF8 476 aaKnown RBP10.71□□□□□ -0.69
CLCN6-202ENST00000346436 PTCD3Q96EY7 689 aaKnown RBP10.71□□□□□ -0.69
CLCN6-202ENST00000346436 TBATAQ96M53 351 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 TMEM209Q96SK2 561 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 ZNF717Q9BY31 904 aaPredicted RBP10.71□□□□□ -0.69
CLCN6-202ENST00000346436 MRPS30Q9NP92 439 aaKnown RBP10.71□□□□□ -0.69
CLCN6-202ENST00000346436 MAT2BQ9NZL9 334 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 SLC2A6Q9UGQ3 507 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 ZDHHC2Q9UIJ5 367 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 RBM7Q9Y580 266 aaKnown RBP10.71□□□□□ -0.69
CLCN6-202ENST00000346436 PI15O43692 258 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 HBQ1P09105 142 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 NCK1P16333 377 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 LPIN1Q14693 890 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 DUS1LQ6P1R4 473 aaKnown RBP10.71□□□□□ -0.69
CLCN6-202ENST00000346436 EPHX4Q8IUS5 362 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 TDHQ8IZJ6 230 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 WDR36Q8NI36 951 aaKnown RBP10.71□□□□□ -0.69
CLCN6-202ENST00000346436 NEK7Q8TDX7 302 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 PTCD2Q8WV60 388 aaKnown RBP10.71□□□□□ -0.69
CLCN6-202ENST00000346436 UTP4Q969X6 686 aaKnown RBP10.71□□□□□ -0.69
CLCN6-202ENST00000346436 C8orf48Q96LL4 319 aa10.71□□□□□ -0.69
CLCN6-202ENST00000346436 RSL24D1Q9UHA3 163 aaKnown RBP10.71□□□□□ -0.69
CLCN6-202ENST00000346436 AXIN1O15169 862 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 ZBTB11O95625 1053 aaPredicted RBP10.71□□□□□ -0.7
CLCN6-202ENST00000346436 HSMCR30P0CW71 290 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 GCAP28676 217 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 PTGES3Q15185 160 aaKnown RBP10.71□□□□□ -0.7
CLCN6-202ENST00000346436 FAM214AQ32MH5 1076 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 LYSMD4Q5XG99 296 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 CDCA2Q69YH5 1023 aaPredicted RBP10.71□□□□□ -0.7
CLCN6-202ENST00000346436 TMEM110Q86TL2 294 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 RAB43Q86YS6 212 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 OFCC1Q8IZS5 231 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 PGAM4Q8N0Y7 254 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 PRRX2Q99811 253 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 ZNF576Q9H609 170 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 HEPACAM2A8MVW5 462 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 IGHEP01854 428 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 TYRP14679 529 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 CCNCP24863 283 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 FOXK1P85037 733 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 NCSTNQ92542 709 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 NELL1Q92832 810 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 C19orf60Q96EN9 201 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 TPD52L3Q96J77 140 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 CLCC1Q96S66 551 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 CCM2Q9BSQ5 444 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 SUV39H2Q9H5I1 410 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 TMEM27Q9HBJ8 222 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 FCF1Q9Y324 198 aaKnown RBP10.71□□□□□ -0.7
CLCN6-202ENST00000346436 PCDHGB5Q9Y5G0 923 aa10.71□□□□□ -0.7
CLCN6-202ENST00000346436 SPIN1Q9Y657 262 aaPredicted RBP10.71□□□□□ -0.7
CLCN6-202ENST00000346436 NPEPPSL1A6NEC2 478 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 TTLL8A6PVC2 850 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 STX11O75558 287 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 CYB5AP00167 134 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 ITGA2P17301 1181 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 CSKP41240 450 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 MAGEA11P43364 429 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 HCAR3P49019 387 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 CLEC20AQ6ZU45 233 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 PEG10Q86TG7 708 aaKnown RBP10.7□□□□□ -0.7
CLCN6-202ENST00000346436 KIAA2013Q8IYS2 634 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 ZNF599Q96NL3 588 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 ZSCAN5AQ9BUG6 496 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 COQ10BQ9H8M1 238 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 SGK2Q9HBY8 427 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 TLR6Q9Y2C9 796 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 XKRYO14609 159 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 CD63P08962 238 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 HAPLN1P10915 354 aaPredicted RBP10.7□□□□□ -0.7
CLCN6-202ENST00000346436 ZNF30P17039 623 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 PRKCHP24723 683 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 SLC7A1P30825 629 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 SOX6P35712 828 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 DAOAP59103 153 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 CCNYL2Q5T2Q4 361 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 LINGO4Q6UY18 593 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 TMPRSS11BQ86T26 416 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 ARFGAP1Q8N6T3 406 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 LINGO1Q96FE5 620 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 MSANTD3Q96H12 275 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 CYP2S1Q96SQ9 504 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 GPR174Q9BXC1 333 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 LMAN1LQ9HAT1 526 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 NMUR1Q9HB89 426 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 H3BN98 237 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 H3BQ06 376 aaPredicted RBP10.7□□□□□ -0.7
CLCN6-202ENST00000346436 DLGAP3O95886 979 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 IFNGP01579 166 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 GALTP07902 379 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 NR4A1P22736 598 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 LARS2Q15031 903 aaKnown RBP10.7□□□□□ -0.7
CLCN6-202ENST00000346436 TXNDC8Q6A555 127 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 NUP54Q7Z3B4 507 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 RTL3Q8N8U3 475 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms